BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043535
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307761.1| predicted protein [Populus trichocarpa] gi|2...   145   3e-33
emb|CBI40732.3| unnamed protein product [Vitis vinifera]              137   7e-31
emb|CAN84084.1| hypothetical protein VITISV_018999 [Vitis vinifera]   137   7e-31
ref|XP_004145547.1| PREDICTED: putative pentatricopeptide repeat...   132   3e-29
ref|XP_002865400.1| pentatricopeptide repeat-containing protein ...   121   7e-26

>ref|XP_002307761.1| predicted protein [Populus trichocarpa] gi|222857210|gb|EEE94757.1|
           predicted protein [Populus trichocarpa]
          Length = 563

 Score =  145 bits (367), Expect = 3e-33
 Identities = 64/101 (63%), Positives = 81/101 (80%)
 Frame = +2

Query: 5   SPDCLTFSYFIEGMGRAGRIEDAVKVFGKLSENGCEADTTVYNAMISNFVSFRELDECMK 184
           SPDCL+FSY +EG+GRAG+IEDAV +FG + E GC  DT VYNAMISNF+S    DECMK
Sbjct: 304 SPDCLSFSYLLEGLGRAGKIEDAVMIFGSMEEKGCVPDTNVYNAMISNFISVGNFDECMK 363

Query: 185 YYRVMIEKGCSPDINTYTILINAFLKARRVADALELFDELL 307
           YYR ++ K C P+I+TYT +I+  +KA +VADALE+FDE+L
Sbjct: 364 YYRCLLSKNCDPNIDTYTRMISGLIKASKVADALEMFDEML 404


>emb|CBI40732.3| unnamed protein product [Vitis vinifera]
          Length = 520

 Score =  137 bits (346), Expect = 7e-31
 Identities = 62/101 (61%), Positives = 81/101 (80%)
 Frame = +2

Query: 5   SPDCLTFSYFIEGMGRAGRIEDAVKVFGKLSENGCEADTTVYNAMISNFVSFRELDECMK 184
           SP+CLTFS+ IEG+GRAGRI+DAV+VF  + E GC  +  VYNA+ISNF+S R+ DEC+K
Sbjct: 261 SPNCLTFSHLIEGLGRAGRIDDAVEVFHHMEETGCVPNACVYNALISNFISTRDFDECLK 320

Query: 185 YYRVMIEKGCSPDINTYTILINAFLKARRVADALELFDELL 307
           YY  M+   C P+++TYT LI AFLKAR+VADALE+ DE++
Sbjct: 321 YYNFMVSSNCDPNMDTYTKLIVAFLKARKVADALEMLDEMV 361


>emb|CAN84084.1| hypothetical protein VITISV_018999 [Vitis vinifera]
          Length = 561

 Score =  137 bits (346), Expect = 7e-31
 Identities = 62/101 (61%), Positives = 81/101 (80%)
 Frame = +2

Query: 5   SPDCLTFSYFIEGMGRAGRIEDAVKVFGKLSENGCEADTTVYNAMISNFVSFRELDECMK 184
           SP+CLTFS+ IEG+GRAGRI+DAV+VF  + E GC  +  VYNA+ISNF+S R+ DEC+K
Sbjct: 302 SPNCLTFSHLIEGLGRAGRIDDAVEVFHHMEETGCVPNACVYNALISNFISTRDFDECLK 361

Query: 185 YYRVMIEKGCSPDINTYTILINAFLKARRVADALELFDELL 307
           YY  M+   C P+++TYT LI AFLKAR+VADALE+ DE++
Sbjct: 362 YYNFMVSSNCDPNMDTYTKLIVAFLKARKVADALEMLDEMV 402


>ref|XP_004145547.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g43820-like [Cucumis sativus]
          Length = 572

 Score =  132 bits (332), Expect = 3e-29
 Identities = 58/101 (57%), Positives = 76/101 (75%)
 Frame = +2

Query: 5   SPDCLTFSYFIEGMGRAGRIEDAVKVFGKLSENGCEADTTVYNAMISNFVSFRELDECMK 184
           SPDCLT +Y IE +GRA +I+DAVK+F K+ ENGC  D   YNAMISNF+   + D+C+ 
Sbjct: 314 SPDCLTHTYLIECLGRANQIDDAVKIFDKMDENGCTPDVDAYNAMISNFICIGDFDQCLT 373

Query: 185 YYRVMIEKGCSPDINTYTILINAFLKARRVADALELFDELL 307
           YY  M+   C PD+NTY+ LI  FLKA++VADALE+FDE++
Sbjct: 374 YYERMLSNRCEPDMNTYSNLITGFLKAKKVADALEMFDEMV 414


>ref|XP_002865400.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297311235|gb|EFH41659.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 675

 Score =  121 bits (303), Expect = 7e-26
 Identities = 51/100 (51%), Positives = 76/100 (76%)
 Frame = +2

Query: 8   PDCLTFSYFIEGMGRAGRIEDAVKVFGKLSENGCEADTTVYNAMISNFVSFRELDECMKY 187
           PDCL++S+ IEG+GRAGRI D+V++F  +   G   D  VYNAMI NF+S R+ DE M+Y
Sbjct: 283 PDCLSYSHLIEGLGRAGRINDSVEIFDNMKHKGSVLDANVYNAMICNFISARDFDESMRY 342

Query: 188 YRVMIEKGCSPDINTYTILINAFLKARRVADALELFDELL 307
           YR M+++ C P++ TY+ L++  +K R+V+DALE+F+E+L
Sbjct: 343 YRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEML 382