BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043494
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25399.3| unnamed protein product [Vitis vinifera]              137   9e-31
ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containi...   137   9e-31
ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containi...   127   7e-28
ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containi...   127   7e-28
emb|CBI15852.3| unnamed protein product [Vitis vinifera]              127   1e-27

>emb|CBI25399.3| unnamed protein product [Vitis vinifera]
          Length = 846

 Score =  137 bits (345), Expect = 9e-31
 Identities = 63/94 (67%), Positives = 75/94 (79%)
 Frame = +2

Query: 5   VSSVNNVIAHSYFKCGSLEDAMKVFERMEERDVISWTTMITAYATSSMGEKALGLFSQMR 184
           V SVNN IA +Y KCG LED  KVF+RMEERD++SWTT++TAY+ SS+GE+AL  F  MR
Sbjct: 406 VVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMR 465

Query: 185 KEGITPNQFTFGSVLAVCGSLCLLDYGRQIHGLL 286
           +EG  PNQFTF SVL  C SLC L+YGRQ+HGLL
Sbjct: 466 EEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLL 499



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 30/84 (35%), Positives = 47/84 (55%)
 Frame = +2

Query: 14  VNNVIAHSYFKCGSLEDAMKVFERMEERDVISWTTMITAYATSSMGEKALGLFSQMRKEG 193
           + + +   Y KCGS+ +A KVF+++   D++SWT +I+ YA   + E AL LF +M   G
Sbjct: 510 IESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSG 569

Query: 194 ITPNQFTFGSVLAVCGSLCLLDYG 265
           I  N  T   VL  C    +++ G
Sbjct: 570 IKANAVTLLCVLFACSHGGMVEEG 593



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 28/86 (32%), Positives = 42/86 (48%)
 Frame = +2

Query: 20  NVIAHSYFKCGSLEDAMKVFERMEERDVISWTTMITAYATSSMGEKALGLFSQMRKEGIT 199
           N  AH Y KC     A  VF+ M +R+V SWT MI       +       F +M   GI 
Sbjct: 105 NHAAHVYSKCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGIL 164

Query: 200 PNQFTFGSVLAVCGSLCLLDYGRQIH 277
           P++F + +++  C  L  L+ G+ +H
Sbjct: 165 PDKFAYSAIIQSCIGLDSLELGKMVH 190



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
 Frame = +2

Query: 14  VNNVIAHSYFKCGSLEDAMKVFERMEERDVIS--WTTMITAYATSSMGEKALGLFSQMRK 187
           V   +   Y KCGSL DA  VF+       ++  W  MI+ Y+ S   ++AL L+ QM +
Sbjct: 305 VGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQ 364

Query: 188 EGITPNQFTFGSVLAVCGSLCLLDYGRQIHGLL 286
            GIT + +T+ SV     +   L +GR +HG++
Sbjct: 365 NGITSDLYTYCSVFNAIAASKSLQFGRVVHGMV 397



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 28/87 (32%), Positives = 48/87 (55%)
 Frame = +2

Query: 14  VNNVIAHSYFKCGSLEDAMKVFERMEERDVISWTTMITAYATSSMGEKALGLFSQMRKEG 193
           V+  + + Y K GS+ED+  VF  M E + +SW  MI+   ++ +  +A  LF +M+   
Sbjct: 204 VSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGA 263

Query: 194 ITPNQFTFGSVLAVCGSLCLLDYGRQI 274
            TPN +T  SV    G L  ++ G+++
Sbjct: 264 CTPNMYTLVSVSKAVGKLVDVNMGKEV 290


>ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 820

 Score =  137 bits (345), Expect = 9e-31
 Identities = 63/94 (67%), Positives = 75/94 (79%)
 Frame = +2

Query: 5   VSSVNNVIAHSYFKCGSLEDAMKVFERMEERDVISWTTMITAYATSSMGEKALGLFSQMR 184
           V SVNN IA +Y KCG LED  KVF+RMEERD++SWTT++TAY+ SS+GE+AL  F  MR
Sbjct: 460 VVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMR 519

Query: 185 KEGITPNQFTFGSVLAVCGSLCLLDYGRQIHGLL 286
           +EG  PNQFTF SVL  C SLC L+YGRQ+HGLL
Sbjct: 520 EEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLL 553



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 30/84 (35%), Positives = 47/84 (55%)
 Frame = +2

Query: 14  VNNVIAHSYFKCGSLEDAMKVFERMEERDVISWTTMITAYATSSMGEKALGLFSQMRKEG 193
           + + +   Y KCGS+ +A KVF+++   D++SWT +I+ YA   + E AL LF +M   G
Sbjct: 564 IESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSG 623

Query: 194 ITPNQFTFGSVLAVCGSLCLLDYG 265
           I  N  T   VL  C    +++ G
Sbjct: 624 IKANAVTLLCVLFACSHGGMVEEG 647



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 28/86 (32%), Positives = 42/86 (48%)
 Frame = +2

Query: 20  NVIAHSYFKCGSLEDAMKVFERMEERDVISWTTMITAYATSSMGEKALGLFSQMRKEGIT 199
           N  AH Y KC     A  VF+ M +R+V SWT MI       +       F +M   GI 
Sbjct: 159 NHAAHVYSKCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGIL 218

Query: 200 PNQFTFGSVLAVCGSLCLLDYGRQIH 277
           P++F + +++  C  L  L+ G+ +H
Sbjct: 219 PDKFAYSAIIQSCIGLDSLELGKMVH 244



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
 Frame = +2

Query: 14  VNNVIAHSYFKCGSLEDAMKVFERMEERDVIS--WTTMITAYATSSMGEKALGLFSQMRK 187
           V   +   Y KCGSL DA  VF+       ++  W  MI+ Y+ S   ++AL L+ QM +
Sbjct: 359 VGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQ 418

Query: 188 EGITPNQFTFGSVLAVCGSLCLLDYGRQIHGLL 286
            GIT + +T+ SV     +   L +GR +HG++
Sbjct: 419 NGITSDLYTYCSVFNAIAASKSLQFGRVVHGMV 451



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 28/87 (32%), Positives = 48/87 (55%)
 Frame = +2

Query: 14  VNNVIAHSYFKCGSLEDAMKVFERMEERDVISWTTMITAYATSSMGEKALGLFSQMRKEG 193
           V+  + + Y K GS+ED+  VF  M E + +SW  MI+   ++ +  +A  LF +M+   
Sbjct: 258 VSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGA 317

Query: 194 ITPNQFTFGSVLAVCGSLCLLDYGRQI 274
            TPN +T  SV    G L  ++ G+++
Sbjct: 318 CTPNMYTLVSVSKAVGKLVDVNMGKEV 344


>ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 766

 Score =  127 bits (320), Expect = 7e-28
 Identities = 55/92 (59%), Positives = 75/92 (81%)
 Frame = +2

Query: 11  SVNNVIAHSYFKCGSLEDAMKVFERMEERDVISWTTMITAYATSSMGEKALGLFSQMRKE 190
           S++N +A++Y KCGSLED  KVF RME+RD+ISWT+++TAY+  S  +KA+ +FS MR E
Sbjct: 412 SISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAE 471

Query: 191 GITPNQFTFGSVLAVCGSLCLLDYGRQIHGLL 286
           GI PNQFTF SVL  C +LCLL+YG+Q+HG++
Sbjct: 472 GIAPNQFTFSSVLVSCANLCLLEYGQQVHGII 503



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 27/86 (31%), Positives = 50/86 (58%)
 Frame = +2

Query: 20  NVIAHSYFKCGSLEDAMKVFERMEERDVISWTTMITAYATSSMGEKALGLFSQMRKEGIT 199
           N +AH+Y KC  ++ A ++F++M +R+  SWT +I   A + +       F +M+ +GI 
Sbjct: 109 NHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIF 168

Query: 200 PNQFTFGSVLAVCGSLCLLDYGRQIH 277
           P+QF +  +L +C  L  ++ G  +H
Sbjct: 169 PDQFAYSGILQICIGLDSIELGNMVH 194



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 34/91 (37%), Positives = 49/91 (53%)
 Frame = +2

Query: 14  VNNVIAHSYFKCGSLEDAMKVFERMEERDVISWTTMITAYATSSMGEKALGLFSQMRKEG 193
           + + +   Y KCG L DA KVF R+   D +SWT +I  +A   + + AL LF +M + G
Sbjct: 514 IESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLG 573

Query: 194 ITPNQFTFGSVLAVCGSLCLLDYGRQIHGLL 286
           + PN  TF  VL  C    L++ G Q   L+
Sbjct: 574 VEPNAVTFLCVLFACSHGGLVEEGLQYFKLM 604



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 30/89 (33%), Positives = 49/89 (55%)
 Frame = +2

Query: 14  VNNVIAHSYFKCGSLEDAMKVFERMEERDVISWTTMITAYATSSMGEKALGLFSQMRKEG 193
           V+  + + Y K   +ED+ KVF  M E +V+SW  MIT + ++ +   A  LF +M  EG
Sbjct: 208 VSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEG 267

Query: 194 ITPNQFTFGSVLAVCGSLCLLDYGRQIHG 280
           +TP+  TF  V    G L  ++  +++ G
Sbjct: 268 VTPDAQTFIGVAKAIGMLRDVNKAKEVSG 296


>ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 766

 Score =  127 bits (320), Expect = 7e-28
 Identities = 55/92 (59%), Positives = 75/92 (81%)
 Frame = +2

Query: 11  SVNNVIAHSYFKCGSLEDAMKVFERMEERDVISWTTMITAYATSSMGEKALGLFSQMRKE 190
           S++N +A++Y KCGSLED  KVF RME+RD+ISWT+++TAY+  S  +KA+ +FS MR E
Sbjct: 412 SISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAE 471

Query: 191 GITPNQFTFGSVLAVCGSLCLLDYGRQIHGLL 286
           GI PNQFTF SVL  C +LCLL+YG+Q+HG++
Sbjct: 472 GIAPNQFTFSSVLVSCANLCLLEYGQQVHGII 503



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 27/86 (31%), Positives = 50/86 (58%)
 Frame = +2

Query: 20  NVIAHSYFKCGSLEDAMKVFERMEERDVISWTTMITAYATSSMGEKALGLFSQMRKEGIT 199
           N +AH+Y KC  ++ A ++F++M +R+  SWT +I   A + +       F +M+ +GI 
Sbjct: 109 NHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIF 168

Query: 200 PNQFTFGSVLAVCGSLCLLDYGRQIH 277
           P+QF +  +L +C  L  ++ G  +H
Sbjct: 169 PDQFAYSGILQICIGLDSIELGNMVH 194



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 34/91 (37%), Positives = 49/91 (53%)
 Frame = +2

Query: 14  VNNVIAHSYFKCGSLEDAMKVFERMEERDVISWTTMITAYATSSMGEKALGLFSQMRKEG 193
           + + +   Y KCG L DA KVF R+   D +SWT +I  +A   + + AL LF +M + G
Sbjct: 514 IESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLG 573

Query: 194 ITPNQFTFGSVLAVCGSLCLLDYGRQIHGLL 286
           + PN  TF  VL  C    L++ G Q   L+
Sbjct: 574 VEPNAVTFLCVLFACSHGGLVEEGLQYFKLM 604



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 30/89 (33%), Positives = 49/89 (55%)
 Frame = +2

Query: 14  VNNVIAHSYFKCGSLEDAMKVFERMEERDVISWTTMITAYATSSMGEKALGLFSQMRKEG 193
           V+  + + Y K   +ED+ KVF  M E +V+SW  MIT + ++ +   A  LF +M  EG
Sbjct: 208 VSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEG 267

Query: 194 ITPNQFTFGSVLAVCGSLCLLDYGRQIHG 280
           +TP+  TF  V    G L  ++  +++ G
Sbjct: 268 VTPDAQTFIGVAKAIGMLRDVNKAKEVSG 296


>emb|CBI15852.3| unnamed protein product [Vitis vinifera]
          Length = 595

 Score =  127 bits (319), Expect = 1e-27
 Identities = 57/95 (60%), Positives = 74/95 (77%)
 Frame = +2

Query: 2   QVSSVNNVIAHSYFKCGSLEDAMKVFERMEERDVISWTTMITAYATSSMGEKALGLFSQM 181
           +V S+NN I  +YFKC SLEDA KVF+RM+ERD++SWTT+++AY       +AL +FSQM
Sbjct: 416 RVLSLNNAIVDAYFKCQSLEDARKVFDRMQERDMVSWTTLVSAYVQCYQPSEALSIFSQM 475

Query: 182 RKEGITPNQFTFGSVLAVCGSLCLLDYGRQIHGLL 286
           R++G  PNQFTF SVL  C SL LL+YGRQ+HGL+
Sbjct: 476 REQGFMPNQFTFSSVLVACASLSLLEYGRQVHGLI 510



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
 Frame = +2

Query: 14  VNNVIAHSYFKCGSLEDAMKVFERMEERDVIS--WTTMITAYATSSMGEKALGLFSQMRK 187
           V   +   Y KCG L DA  VF+R   +  ++  W  MI++Y      ++AL LF +M  
Sbjct: 316 VGTSLIDMYSKCGHLSDARSVFDRNFYKSKVNNPWNAMISSYTQCGYWQEALDLFIEMSL 375

Query: 188 EGITPNQFTFGSVLAVCGSLCLLDYGRQIHGLL 286
             + P+ +T+G V +   +L  L +GRQ+HG++
Sbjct: 376 NDVKPDLYTYGGVFSAIAALKWLYFGRQVHGMV 408



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/87 (29%), Positives = 44/87 (50%)
 Frame = +2

Query: 20  NVIAHSYFKCGSLEDAMKVFERMEERDVISWTTMITAYATSSMGEKALGLFSQMRKEGIT 199
           N +A+ Y +C    +A +VF+ M  R+  SWT MI     + +       F  M  +GI 
Sbjct: 116 NHVAYMYAECSCFVEAWRVFDGMPHRNSFSWTVMIAGSKKNGLFLDGFRFFYDMLVDGIL 175

Query: 200 PNQFTFGSVLAVCGSLCLLDYGRQIHG 280
           P++F + +V+  C  L  ++ G  +HG
Sbjct: 176 PDEFVYSAVIQSCIGLGCIELGEAVHG 202