BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043467
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635488.1| PREDICTED: pentatricopeptide repeat-containi...    65   7e-09
ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containi...    65   7e-09
emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]    65   7e-09
ref|XP_002875992.1| pentatricopeptide repeat-containing protein ...    63   3e-08
ref|NP_190540.1| pentatricopeptide repeat-containing protein [Ar...    63   3e-08

>ref|XP_003635488.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Vitis vinifera]
          Length = 358

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 27/32 (84%), Positives = 29/32 (90%)
 Frame = +1

Query: 1   FISAIVGREITVRDSLRFHCFKEGRCSCDDYW 96
           FISAI GREITVRD+ RFHCFKEG+CSC DYW
Sbjct: 327 FISAIAGREITVRDAHRFHCFKEGQCSCGDYW 358


>ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Vitis vinifera]
          Length = 719

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 27/32 (84%), Positives = 29/32 (90%)
 Frame = +1

Query: 1   FISAIVGREITVRDSLRFHCFKEGRCSCDDYW 96
           FISAI GREITVRD+ RFHCFKEG+CSC DYW
Sbjct: 688 FISAIAGREITVRDAHRFHCFKEGQCSCGDYW 719


>emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
          Length = 719

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 27/32 (84%), Positives = 29/32 (90%)
 Frame = +1

Query: 1   FISAIVGREITVRDSLRFHCFKEGRCSCDDYW 96
           FISAI GREITVRD+ RFHCFKEG+CSC DYW
Sbjct: 688 FISAIAGREITVRDAHRFHCFKEGQCSCGDYW 719


>ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297321830|gb|EFH52251.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 721

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 24/32 (75%), Positives = 29/32 (90%)
 Frame = +1

Query: 1   FISAIVGREITVRDSLRFHCFKEGRCSCDDYW 96
           F+SA+ GREI VRD+LRFHCFK+G+CSC DYW
Sbjct: 690 FMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721


>ref|NP_190540.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75183401|sp|Q9M2Y7.1|PP274_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g49710 gi|6723416|emb|CAB66909.1| putative protein
           [Arabidopsis thaliana] gi|332645058|gb|AEE78579.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 721

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 24/32 (75%), Positives = 29/32 (90%)
 Frame = +1

Query: 1   FISAIVGREITVRDSLRFHCFKEGRCSCDDYW 96
           F+SA+ GREI VRD+LRFHCFK+G+CSC DYW
Sbjct: 690 FMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721