BLASTX nr result

ID: Coptis25_contig00043455 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043455
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19327.3| unnamed protein product [Vitis vinifera]              168   5e-40
ref|XP_002283609.1| PREDICTED: multidrug and toxin extrusion pro...   168   5e-40
ref|XP_002510003.1| multidrug resistance pump, putative [Ricinus...   167   6e-40
ref|XP_002301101.1| predicted protein [Populus trichocarpa] gi|2...   165   3e-39
ref|XP_003518276.1| PREDICTED: MATE efflux family protein DTX1-l...   157   8e-37

>emb|CBI19327.3| unnamed protein product [Vitis vinifera]
          Length = 576

 Score =  168 bits (425), Expect = 5e-40
 Identities = 87/119 (73%), Positives = 91/119 (76%)
 Frame = -3

Query: 359 KISGPTALTGLVLYSRAMISMLFLGYXXXXXXXXXXXSIGFANITGYSVISGLAMGMEPI 180
           KISGPTA+TGL+LYSRAMISMLFLGY           SIGFANITGYSVISGLAMGMEPI
Sbjct: 31  KISGPTAVTGLLLYSRAMISMLFLGYLGELELAGGSLSIGFANITGYSVISGLAMGMEPI 90

Query: 179 CGQAFGAKQWKXXXXXXXXXXXXXLSASIPISFMWLNMKRILLWCGQDEEISATAHVFI 3
           CGQA+GAKQWK             LS SIPISFMWLNMKRIL WCGQDEEIS+ AH FI
Sbjct: 91  CGQAYGAKQWKLLGLTLQRTVLLLLSTSIPISFMWLNMKRILSWCGQDEEISSMAHTFI 149


>ref|XP_002283609.1| PREDICTED: multidrug and toxin extrusion protein 1 [Vitis vinifera]
           gi|147802486|emb|CAN77415.1| hypothetical protein
           VITISV_000475 [Vitis vinifera]
          Length = 527

 Score =  168 bits (425), Expect = 5e-40
 Identities = 87/119 (73%), Positives = 91/119 (76%)
 Frame = -3

Query: 359 KISGPTALTGLVLYSRAMISMLFLGYXXXXXXXXXXXSIGFANITGYSVISGLAMGMEPI 180
           KISGPTA+TGL+LYSRAMISMLFLGY           SIGFANITGYSVISGLAMGMEPI
Sbjct: 31  KISGPTAVTGLLLYSRAMISMLFLGYLGELELAGGSLSIGFANITGYSVISGLAMGMEPI 90

Query: 179 CGQAFGAKQWKXXXXXXXXXXXXXLSASIPISFMWLNMKRILLWCGQDEEISATAHVFI 3
           CGQA+GAKQWK             LS SIPISFMWLNMKRIL WCGQDEEIS+ AH FI
Sbjct: 91  CGQAYGAKQWKLLGLTLQRTVLLLLSTSIPISFMWLNMKRILSWCGQDEEISSMAHTFI 149


>ref|XP_002510003.1| multidrug resistance pump, putative [Ricinus communis]
           gi|223550704|gb|EEF52190.1| multidrug resistance pump,
           putative [Ricinus communis]
          Length = 528

 Score =  167 bits (424), Expect = 6e-40
 Identities = 86/119 (72%), Positives = 92/119 (77%)
 Frame = -3

Query: 359 KISGPTALTGLVLYSRAMISMLFLGYXXXXXXXXXXXSIGFANITGYSVISGLAMGMEPI 180
           KISGPTA+TGL+LYSRAMISMLFLGY           SIGFANITGYSVISGLAMGMEPI
Sbjct: 30  KISGPTAITGLILYSRAMISMLFLGYLGELELAGGSLSIGFANITGYSVISGLAMGMEPI 89

Query: 179 CGQAFGAKQWKXXXXXXXXXXXXXLSASIPISFMWLNMKRILLWCGQDEEISATAHVFI 3
           CGQA+GAKQ K             LS S+PISFMWLNMKRILLWCGQD+EIS+TAH FI
Sbjct: 90  CGQAYGAKQMKFLGLTLQRTVLLLLSTSVPISFMWLNMKRILLWCGQDQEISSTAHTFI 148


>ref|XP_002301101.1| predicted protein [Populus trichocarpa] gi|222842827|gb|EEE80374.1|
           predicted protein [Populus trichocarpa]
          Length = 528

 Score =  165 bits (418), Expect = 3e-39
 Identities = 84/119 (70%), Positives = 90/119 (75%)
 Frame = -3

Query: 359 KISGPTALTGLVLYSRAMISMLFLGYXXXXXXXXXXXSIGFANITGYSVISGLAMGMEPI 180
           KISGPTA+TGLVLYSRAMISMLFLGY           SIGFANITGYSV+SGLAMGMEPI
Sbjct: 31  KISGPTAMTGLVLYSRAMISMLFLGYLGELELAGGSLSIGFANITGYSVLSGLAMGMEPI 90

Query: 179 CGQAFGAKQWKXXXXXXXXXXXXXLSASIPISFMWLNMKRILLWCGQDEEISATAHVFI 3
           CGQA+GAK WK             LS S+PISFMWLNMK ILLWCGQD+EIS+ AH FI
Sbjct: 91  CGQAYGAKHWKILGLTLQRTVLLLLSTSVPISFMWLNMKSILLWCGQDKEISSVAHTFI 149


>ref|XP_003518276.1| PREDICTED: MATE efflux family protein DTX1-like [Glycine max]
          Length = 527

 Score =  157 bits (397), Expect = 8e-37
 Identities = 81/119 (68%), Positives = 89/119 (74%)
 Frame = -3

Query: 359 KISGPTALTGLVLYSRAMISMLFLGYXXXXXXXXXXXSIGFANITGYSVISGLAMGMEPI 180
           +IS PTA+TGL+LYSRAMISM+FLGY           SIGFANITGYSVISGLAMGMEPI
Sbjct: 9   RISCPTAITGLILYSRAMISMIFLGYLGEMELAGGSLSIGFANITGYSVISGLAMGMEPI 68

Query: 179 CGQAFGAKQWKXXXXXXXXXXXXXLSASIPISFMWLNMKRILLWCGQDEEISATAHVFI 3
           CGQA+GAKQWK             LS SIPISFMWLNMKRILLW GQD+EI++ A  FI
Sbjct: 69  CGQAYGAKQWKILGLTLQRTVLLLLSTSIPISFMWLNMKRILLWSGQDQEIASVAQTFI 127


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