BLASTX nr result

ID: Coptis25_contig00043451 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043451
         (241 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003609136.1| hypothetical protein MTR_4g112370 [Medicago ...    97   1e-18
gb|ACJ84318.1| unknown [Medicago truncatula] gi|388515575|gb|AFK...    97   1e-18
ref|XP_002315967.1| predicted protein [Populus trichocarpa] gi|2...    93   2e-17
ref|XP_003549815.1| PREDICTED: uncharacterized protein LOC100797...    93   3e-17
ref|XP_003551255.1| PREDICTED: uncharacterized protein LOC100814...    90   2e-16

>ref|XP_003609136.1| hypothetical protein MTR_4g112370 [Medicago truncatula]
           gi|355510191|gb|AES91333.1| hypothetical protein
           MTR_4g112370 [Medicago truncatula]
          Length = 322

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 47/64 (73%), Positives = 54/64 (84%)
 Frame = -3

Query: 197 LQTMAAARFRSVLIAFNKRRSHNSSGLGSRVVGTLFGYRRGHVHFAFQEDSKANPAFMIE 18
           LQT+A +R RSVL  F+K RS+  SGLGSRVVGTLFGYRRGHVHFAFQ+D  + PAF+IE
Sbjct: 63  LQTVAISRIRSVLTVFSKNRSNLPSGLGSRVVGTLFGYRRGHVHFAFQKDPTSQPAFLIE 122

Query: 17  LATP 6
           LATP
Sbjct: 123 LATP 126


>gb|ACJ84318.1| unknown [Medicago truncatula] gi|388515575|gb|AFK45849.1| unknown
           [Medicago truncatula]
          Length = 255

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 47/64 (73%), Positives = 54/64 (84%)
 Frame = -3

Query: 197 LQTMAAARFRSVLIAFNKRRSHNSSGLGSRVVGTLFGYRRGHVHFAFQEDSKANPAFMIE 18
           LQT+A +R RSVL  F+K RS+  SGLGSRVVGTLFGYRRGHVHFAFQ+D  + PAF+IE
Sbjct: 63  LQTVAISRIRSVLTVFSKNRSNLPSGLGSRVVGTLFGYRRGHVHFAFQKDPTSQPAFLIE 122

Query: 17  LATP 6
           LATP
Sbjct: 123 LATP 126


>ref|XP_002315967.1| predicted protein [Populus trichocarpa] gi|222865007|gb|EEF02138.1|
           predicted protein [Populus trichocarpa]
          Length = 263

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 45/65 (69%), Positives = 52/65 (80%)
 Frame = -3

Query: 197 LQTMAAARFRSVLIAFNKRRSHNSSGLGSRVVGTLFGYRRGHVHFAFQEDSKANPAFMIE 18
           L  +A ++ RS L  F+K RS   SGLG+RVVGTLFGYRRGHVHFAFQED+K NPA +IE
Sbjct: 74  LPILAFSKLRSALTVFSKSRSAYHSGLGTRVVGTLFGYRRGHVHFAFQEDAKQNPALLIE 133

Query: 17  LATPT 3
           LATPT
Sbjct: 134 LATPT 138


>ref|XP_003549815.1| PREDICTED: uncharacterized protein LOC100797914 [Glycine max]
          Length = 282

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 45/64 (70%), Positives = 52/64 (81%)
 Frame = -3

Query: 197 LQTMAAARFRSVLIAFNKRRSHNSSGLGSRVVGTLFGYRRGHVHFAFQEDSKANPAFMIE 18
           LQ +A +R RSVL  F+K RS+   GLGSRVVGTLFGYRRGHVHFAFQ+D  + PAF+IE
Sbjct: 93  LQAVAISRLRSVLTVFSKNRSNLPFGLGSRVVGTLFGYRRGHVHFAFQKDPTSQPAFLIE 152

Query: 17  LATP 6
           LATP
Sbjct: 153 LATP 156


>ref|XP_003551255.1| PREDICTED: uncharacterized protein LOC100814991 [Glycine max]
          Length = 316

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 45/68 (66%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
 Frame = -3

Query: 197 LQTMAAARFRSVLIAFNKRRSHNSS----GLGSRVVGTLFGYRRGHVHFAFQEDSKANPA 30
           LQ +A +R RSVL  FNK +++N S    GLGSRVVGTLFGYR GHVHFAFQ+D  + PA
Sbjct: 113 LQAVAVSRIRSVLTVFNKNKNNNRSNSALGLGSRVVGTLFGYRLGHVHFAFQKDPTSQPA 172

Query: 29  FMIELATP 6
           F+IELATP
Sbjct: 173 FLIELATP 180


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