BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043448
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]              110   2e-22
emb|CCH50966.1| T4.5 [Malus x robusta]                                 97   1e-18
emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera]    96   4e-18
emb|CAN68364.1| hypothetical protein VITISV_021899 [Vitis vinifera]    92   3e-17
emb|CCH50989.1| T2.10 [Malus x robusta]                                91   8e-17

>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score =  110 bits (274), Expect = 2e-22
 Identities = 52/82 (63%), Positives = 64/82 (78%)
 Frame = -3

Query: 283  YTSNISVISLANNPVFHARTKHVEIDYHYVRELVTSKNLEVKYLCTKDQLADIFTKGLSV 104
            +  NIS ISLA+NPVFH+RTKH+E+DYHYVR+ V  + L V Y+ T DQ ADIFTKGLS 
Sbjct: 1294 WCDNISSISLASNPVFHSRTKHIEVDYHYVRDKVVRQELAVSYVSTADQTADIFTKGLST 1353

Query: 103  RRFQFLLSKLSVQPSPFSLKGS 38
            +RFQFL SKL V+  P SL+G+
Sbjct: 1354 QRFQFLASKLPVRARPLSLRGN 1375


>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 50/86 (58%), Positives = 63/86 (73%)
 Frame = -3

Query: 283  YTSNISVISLANNPVFHARTKHVEIDYHYVRELVTSKNLEVKYLCTKDQLADIFTKGLSV 104
            Y  N SVI+LA NPVFHARTKHVEIDYHY+RE V   ++ V+++ +  Q+ADIFTK L+ 
Sbjct: 1577 YCDNKSVIALAFNPVFHARTKHVEIDYHYIREKVLLGHIGVQHVASLLQIADIFTKPLAA 1636

Query: 103  RRFQFLLSKLSVQPSPFSLKGSIKDI 26
             RF  L SKLSV+   FSL+G +K I
Sbjct: 1637 DRFAALTSKLSVRSPSFSLRGCVKSI 1662


>emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera]
          Length = 1131

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 46/86 (53%), Positives = 59/86 (68%)
 Frame = -3

Query: 283  YTSNISVISLANNPVFHARTKHVEIDYHYVRELVTSKNLEVKYLCTKDQLADIFTKGLSV 104
            Y  N+S   LA NPV H+R KHVEIDYH+VRE V  K L+V++L +KDQ+ DI TK LS 
Sbjct: 1040 YYDNLSTTYLATNPVLHSRAKHVEIDYHFVRERVLPKTLDVRFLPSKDQVVDILTKALST 1099

Query: 103  RRFQFLLSKLSVQPSPFSLKGSIKDI 26
            +RF  L SKL+V   P  L+G +K +
Sbjct: 1100 QRFLHLRSKLTVLSRPMCLRGDVKKL 1125


>emb|CAN68364.1| hypothetical protein VITISV_021899 [Vitis vinifera]
          Length = 431

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 44/84 (52%), Positives = 58/84 (69%)
 Frame = -3

Query: 283 YTSNISVISLANNPVFHARTKHVEIDYHYVRELVTSKNLEVKYLCTKDQLADIFTKGLSV 104
           Y  N+S   LA NP+ H+R KHVEIDYH+VRE V  K L+V++L ++DQ+ADI TK LS 
Sbjct: 246 YCDNLSTTYLAANPILHSRAKHVEIDYHFVRERVLQKTLDVRFLPSEDQVADILTKSLST 305

Query: 103 RRFQFLLSKLSVQPSPFSLKGSIK 32
           + F  L SKL+V   P  L+G +K
Sbjct: 306 QHFLHLRSKLTVLSRPVCLRGDVK 329


>emb|CCH50989.1| T2.10 [Malus x robusta]
          Length = 328

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 42/82 (51%), Positives = 59/82 (71%)
 Frame = -3

Query: 277 SNISVISLANNPVFHARTKHVEIDYHYVRELVTSKNLEVKYLCTKDQLADIFTKGLSVRR 98
           S+I  IS+A NP+FHARTKHVEIDYH + E V  + +   ++C++DQ+ D++TK LS  R
Sbjct: 239 SSIPTISMAKNPIFHARTKHVEIDYHCISEKVLVQEISGHFVCSQDQVVDVYTKALSKSR 298

Query: 97  FQFLLSKLSVQPSPFSLKGSIK 32
           F FL  KL+++   FSL+G IK
Sbjct: 299 FIFLRDKLALRHPQFSLRGDIK 320