BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043434
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...    70   1e-10
gb|ABW81094.1| RT6non-ltr [Cleome spinosa]                             68   7e-10
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali...    67   2e-09
ref|XP_003533176.1| PREDICTED: uncharacterized protein LOC100777...    65   2e-09
ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811...    64   3e-09

>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 1223

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 33/83 (39%), Positives = 53/83 (63%)
 Frame = -1

Query: 249 TGLHINYSKTSILTGSMSSTESNQVADLLGVTLVEPPIIYLGLPLTATRLGIKVCMPLVE 70
           +GL I+  K+++    +S+T  N+VAD    +  + P+ YLGLPL   RL    C+PL+E
Sbjct: 732 SGLRISLEKSTVYLAGLSATARNEVADRFPFSSGQLPVRYLGLPLITKRLSTTDCLPLLE 791

Query: 69  KITERISNWKNKSLSKAGRLELV 1
           ++ +RI +W ++ LS AGRL L+
Sbjct: 792 QVRKRIGSWTSRFLSYAGRLNLI 814


>gb|ABW81094.1| RT6non-ltr [Cleome spinosa]
          Length = 459

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 32/83 (38%), Positives = 52/83 (62%)
 Frame = -1

Query: 249 TGLHINYSKTSILTGSMSSTESNQVADLLGVTLVEPPIIYLGLPLTATRLGIKVCMPLVE 70
           +GL +N  K  +  G ++ +E  +++  +G+TL   P+ YLGLP+   RL      PL+E
Sbjct: 96  SGLEVNTGKCEMFLGGLTDSEKQELSSCMGITLGNFPMKYLGLPVNTHRLTKADYEPLLE 155

Query: 69  KITERISNWKNKSLSKAGRLELV 1
           KI  ++SNW +K LS AG+++LV
Sbjct: 156 KIRAKVSNWSSKLLSYAGKIQLV 178


>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|20197043|gb|AAM14892.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 1412

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 34/83 (40%), Positives = 51/83 (61%)
 Frame = -1

Query: 249  TGLHINYSKTSILTGSMSSTESNQVADLLGVTLVEPPIIYLGLPLTATRLGIKVCMPLVE 70
            +GL+I+  K+++   S+SS     +           P+ YLGLPL   R+ +  C+PL+E
Sbjct: 987  SGLNISLEKSTLFMASISSETCASILARFPFDSGSLPVRYLGLPLMTKRMTLADCLPLLE 1046

Query: 69   KITERISNWKNKSLSKAGRLELV 1
            KI  RIS+WKN+ LS AGRL+L+
Sbjct: 1047 KIRSRISSWKNRFLSYAGRLQLL 1069


>ref|XP_003533176.1| PREDICTED: uncharacterized protein LOC100777167 [Glycine max]
          Length = 1324

 Score = 65.1 bits (157), Expect(2) = 2e-09
 Identities = 31/83 (37%), Positives = 49/83 (59%)
 Frame = -1

Query: 249  TGLHINYSKTSILTGSMSSTESNQVADLLGVTLVEPPIIYLGLPLTATRLGIKVCMPLVE 70
            TGL +N +K  +  G M       +  +      + P+ YLG+PL+  RL I+  MPL++
Sbjct: 924  TGLKVNPAKCQMFFGGMDGCSKENLRRITDFAEGKLPVRYLGMPLSCKRLTIQQYMPLID 983

Query: 69   KITERISNWKNKSLSKAGRLELV 1
            KI +R+ +W +K LS AGR++LV
Sbjct: 984  KIVDRVKHWTSKLLSHAGRIQLV 1006



 Score = 21.6 bits (44), Expect(2) = 2e-09
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 319 LLFSKGDMRSLEAIKGVIMKF 257
           LLF +GD +S+  +   I KF
Sbjct: 900 LLFCRGDSKSVSMMMETIRKF 920


>ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811508 [Glycine max]
          Length = 1441

 Score = 64.3 bits (155), Expect(2) = 3e-09
 Identities = 31/83 (37%), Positives = 49/83 (59%)
 Frame = -1

Query: 249  TGLHINYSKTSILTGSMSSTESNQVADLLGVTLVEPPIIYLGLPLTATRLGIKVCMPLVE 70
            TGL +N +K  +  G M       +  +      + P+ YLG+PL+  RL I+  MPL++
Sbjct: 1041 TGLKVNPAKCQMFFGGMDGCSKENLRRITDFAEGKLPVRYLGVPLSCKRLTIQQYMPLID 1100

Query: 69   KITERISNWKNKSLSKAGRLELV 1
            KI +R+ +W +K LS AGR++LV
Sbjct: 1101 KIVDRVKHWTSKLLSYAGRIQLV 1123



 Score = 21.6 bits (44), Expect(2) = 3e-09
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 319  LLFSKGDMRSLEAIKGVIMKF 257
            LLF +GD +S+  +   I KF
Sbjct: 1017 LLFCRGDSKSVSMMMETIRKF 1037