BLASTX nr result

ID: Coptis25_contig00043421 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043421
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517593.1| Disease resistance protein RFL1, putative [R...    64   1e-08
ref|XP_002266171.2| PREDICTED: probable disease resistance prote...    62   4e-08
emb|CAN74430.1| hypothetical protein VITISV_010987 [Vitis vinifera]    62   4e-08
emb|CBI36497.3| unnamed protein product [Vitis vinifera]               62   5e-08
ref|XP_002517610.1| Disease resistance protein RFL1, putative [R...    62   6e-08

>ref|XP_002517593.1| Disease resistance protein RFL1, putative [Ricinus communis]
           gi|223543225|gb|EEF44757.1| Disease resistance protein
           RFL1, putative [Ricinus communis]
          Length = 881

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 32/83 (38%), Positives = 51/83 (61%), Gaps = 7/83 (8%)
 Frame = -2

Query: 241 INQPACFRSLHRLELQKCDAMVNLTWLLLVPNIETVVVDNCQRIEEIISD-------NYG 83
           I++  CF SL  + ++KC  +V+LTWL+L PN++ + V  C+++EEIIS          G
Sbjct: 733 ISRNICFSSLQEVRVEKCFDLVDLTWLVLAPNLKILAVTTCRKMEEIISSGVLGQVPEVG 792

Query: 82  GDENTFSKLRTLQLWKLPCLQSI 14
                F+KL+ L+L  LP ++SI
Sbjct: 793 KSLKVFAKLQVLELQNLPQMKSI 815


>ref|XP_002266171.2| PREDICTED: probable disease resistance protein At5g63020-like
           [Vitis vinifera]
          Length = 781

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 33/79 (41%), Positives = 49/79 (62%), Gaps = 8/79 (10%)
 Frame = -2

Query: 223 FRSLHRLELQKCDAMVNLTWLLLVPNIETVVVDNCQRIEEIISDNYG------GDENT-- 68
           F  LH + +  C  ++NLTWL+  P ++ + V  C+ +EE+I D+ G      G+EN+  
Sbjct: 625 FCMLHEVHIISCSKLLNLTWLIHAPCLQLLAVSACESMEEVIGDDDGGGRASVGEENSGL 684

Query: 67  FSKLRTLQLWKLPCLQSIC 11
           FS+L TLQL  LP L+SIC
Sbjct: 685 FSRLTTLQLEGLPKLKSIC 703


>emb|CAN74430.1| hypothetical protein VITISV_010987 [Vitis vinifera]
          Length = 2471

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 33/79 (41%), Positives = 49/79 (62%), Gaps = 8/79 (10%)
 Frame = -2

Query: 223  FRSLHRLELQKCDAMVNLTWLLLVPNIETVVVDNCQRIEEIISDNYG------GDENT-- 68
            F  LH + +  C  ++NLTWL+  P ++ + V  C+ +EE+I D+ G      G+EN+  
Sbjct: 2315 FCMLHEVHIISCSKLLNLTWLIHAPCLQLLAVSACESMEEVIGDDDGGGRASVGEENSGL 2374

Query: 67   FSKLRTLQLWKLPCLQSIC 11
            FS+L TLQL  LP L+SIC
Sbjct: 2375 FSRLTTLQLEGLPKLKSIC 2393


>emb|CBI36497.3| unnamed protein product [Vitis vinifera]
          Length = 565

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 28/77 (36%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
 Frame = -2

Query: 226 CFRSLHRLELQKCDAMVNLTWLLLVPNIETVVVDNCQRIEEIISDNY--GGDENTFSKLR 53
           CF  L R+ + +C  + NLTWL+  PN+  + +  C  IEE+I      GG+ + F+KL+
Sbjct: 427 CFHGLRRVVINRCQMLKNLTWLIFAPNLLYLTIGQCDEIEEVIGKGAEDGGNLSPFTKLK 486

Query: 52  TLQLWKLPCLQSICKTP 2
            L+L  LP L+++ + P
Sbjct: 487 RLELNGLPQLKNVYRNP 503


>ref|XP_002517610.1| Disease resistance protein RFL1, putative [Ricinus communis]
           gi|223543242|gb|EEF44774.1| Disease resistance protein
           RFL1, putative [Ricinus communis]
          Length = 894

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 32/78 (41%), Positives = 48/78 (61%), Gaps = 7/78 (8%)
 Frame = -2

Query: 226 CFRSLHRLELQKCDAMVNLTWLLLVPNIETVVVDNCQRIEEIISDN-----YGGDE--NT 68
           CF SLH + + +C  + +LTWL+L PN+  +VV +C+ +E++IS         GDE  N 
Sbjct: 741 CFDSLHTVTVSECYHLQDLTWLILAPNLANLVVSSCEELEQVISSEKLGEVLDGDEKLNP 800

Query: 67  FSKLRTLQLWKLPCLQSI 14
           F ++  L L KLP L+SI
Sbjct: 801 FWRIELLTLQKLPRLKSI 818