BLASTX nr result
ID: Coptis25_contig00043415
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00043415 (376 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_193181.3| uncharacterized protein [Arabidopsis thaliana] ... 68 7e-10 ref|XP_002284531.1| PREDICTED: uncharacterized protein At4g14450... 67 1e-09 emb|CAN71216.1| hypothetical protein VITISV_033484 [Vitis vinifera] 67 1e-09 ref|XP_003536253.1| PREDICTED: uncharacterized protein At4g14450... 67 2e-09 ref|XP_002870312.1| hypothetical protein ARALYDRAFT_915420 [Arab... 67 2e-09 >ref|NP_193181.3| uncharacterized protein [Arabidopsis thaliana] gi|75127082|sp|Q6NN02.1|Y4445_ARATH RecName: Full=Uncharacterized protein At4g14450, chloroplastic; Flags: Precursor gi|38603896|gb|AAR24693.1| At4g14450 [Arabidopsis thaliana] gi|41349908|gb|AAS00339.1| At4g14450 [Arabidopsis thaliana] gi|332658046|gb|AEE83446.1| uncharacterized protein [Arabidopsis thaliana] Length = 125 Score = 68.2 bits (165), Expect = 7e-10 Identities = 41/107 (38%), Positives = 54/107 (50%), Gaps = 2/107 (1%) Frame = -2 Query: 342 TMANEQQNQTNPNPKRSSLQKRAPSAIQVSTPFSSCTESWNVVIPLLSPLYISPVDDLKV 163 TM + + + S LQ+RAPS + T FS+ WNV IPLLSPL S Sbjct: 22 TMQRTSSSAASNERQLSQLQRRAPSLMIKPTSFSN----WNVAIPLLSPLAPSLTSSFDQ 77 Query: 162 EVEAKTSFNEELKVDSQIEKKKSVFRMWQHP--PFCYDSATLVTPFV 28 E+ V+ ++ KK VF+ WQHP PFCY+ T V PF+ Sbjct: 78 SHVPPPQNKTEIPVEEEV-KKTPVFKKWQHPASPFCYEPTTFVPPFI 123 >ref|XP_002284531.1| PREDICTED: uncharacterized protein At4g14450, chloroplastic-like [Vitis vinifera] Length = 104 Score = 67.4 bits (163), Expect = 1e-09 Identities = 43/109 (39%), Positives = 58/109 (53%), Gaps = 5/109 (4%) Frame = -2 Query: 339 MANEQQNQTNPNPKR---SSLQKRAPSAIQVSTPFSSCTESWNVVIPLLSPLYISPVDDL 169 MA+ Q + + R S LQ+RAPS++Q+S W V IPLLSPL SP Sbjct: 1 MADTSQTRPSAGVNRRPPSRLQRRAPSSLQISP-----AADWKVAIPLLSPLATSPSSPK 55 Query: 168 KVEVEAKTSFNEELKVDSQIEKKKSVFRMWQHP--PFCYDSATLVTPFV 28 ++ A+ EE + E +K VF+ WQHP PFCY+ A+ V FV Sbjct: 56 LIDRTAEVKPKEEPR--QMKEGEKPVFKKWQHPAAPFCYEPASFVRSFV 102 >emb|CAN71216.1| hypothetical protein VITISV_033484 [Vitis vinifera] Length = 104 Score = 67.4 bits (163), Expect = 1e-09 Identities = 43/109 (39%), Positives = 58/109 (53%), Gaps = 5/109 (4%) Frame = -2 Query: 339 MANEQQNQTNPNPKR---SSLQKRAPSAIQVSTPFSSCTESWNVVIPLLSPLYISPVDDL 169 MA+ Q + + R S LQ+RAPS++Q+S W V IPLLSPL SP Sbjct: 1 MADTSQTRPSAGVNRRPPSRLQRRAPSSLQISP-----AADWKVAIPLLSPLATSPSSPK 55 Query: 168 KVEVEAKTSFNEELKVDSQIEKKKSVFRMWQHP--PFCYDSATLVTPFV 28 ++ A+ EE + E +K VF+ WQHP PFCY+ A+ V FV Sbjct: 56 LIDRTAEVKPKEEPRQTK--EGEKPVFKKWQHPAAPFCYEPASFVRSFV 102 >ref|XP_003536253.1| PREDICTED: uncharacterized protein At4g14450, chloroplastic-like [Glycine max] Length = 95 Score = 66.6 bits (161), Expect = 2e-09 Identities = 44/107 (41%), Positives = 55/107 (51%), Gaps = 3/107 (2%) Frame = -2 Query: 339 MANEQQNQTNPNPKRSSLQKRAPSAIQVSTPFSSCTESWNVVIPLLSPLYISPVD-DLKV 163 M+N Q N P R LQ+RAPS++Q++ WNV IPLLSPL SP +LK Sbjct: 1 MSNPQTNNNRHQPSR--LQRRAPSSLQINRAVE-----WNVAIPLLSPLASSPPPMELKP 53 Query: 162 EVEAKTSFNEELKVDSQIEKKKSVFRMWQHP--PFCYDSATLVTPFV 28 E + EK F+ WQHP PFCY+ A +V PFV Sbjct: 54 PQEPP---------QREAEKVTVSFKKWQHPAAPFCYEPAPMVPPFV 91 >ref|XP_002870312.1| hypothetical protein ARALYDRAFT_915420 [Arabidopsis lyrata subsp. lyrata] gi|297316148|gb|EFH46571.1| hypothetical protein ARALYDRAFT_915420 [Arabidopsis lyrata subsp. lyrata] Length = 105 Score = 66.6 bits (161), Expect = 2e-09 Identities = 43/115 (37%), Positives = 58/115 (50%), Gaps = 10/115 (8%) Frame = -2 Query: 342 TMANEQQNQTNPNPKRSSLQKRAPSAIQVSTPFSSCTESWNVVIPLLSPLYISPVDDLKV 163 TM + N + S LQ+RAPS I T + +WN+ IPLLSPL SP Sbjct: 4 TMQRTSSSAANNEMQHSQLQRRAPSLIIKPT-----STNWNMAIPLLSPLAPSP------ 52 Query: 162 EVEAKTSFNE------ELKVDSQIE--KKKSVFRMWQHP--PFCYDSATLVTPFV 28 ++SFN+ K + +E KK +F+ WQHP PFCY+ T V PF+ Sbjct: 53 ----RSSFNQSHVPPPHNKTEKPVEEVKKTPIFKKWQHPASPFCYEQTTFVPPFM 103