BLASTX nr result

ID: Coptis25_contig00043394 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043394
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518909.1| alpha/beta hydrolase domain containing prote...    65   7e-09
emb|CBI34585.3| unnamed protein product [Vitis vinifera]               61   1e-07
ref|XP_002280182.1| PREDICTED: embryogenesis-associated protein ...    61   1e-07
ref|XP_004143840.1| PREDICTED: embryogenesis-associated protein ...    57   1e-06
ref|XP_004163575.1| PREDICTED: embryogenesis-associated protein ...    57   2e-06

>ref|XP_002518909.1| alpha/beta hydrolase domain containing protein 1,3, putative
           [Ricinus communis] gi|223541896|gb|EEF43442.1|
           alpha/beta hydrolase domain containing protein 1,3,
           putative [Ricinus communis]
          Length = 425

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 35/65 (53%), Positives = 43/65 (66%), Gaps = 8/65 (12%)
 Frame = +3

Query: 99  HHPSLHI-TNTFTTMSQ-------TLELTGGARDTYLSVFKSLNLPYNPFPIICWNRHLE 254
           HHPS  +   T TTMS        +LE+ GGARDT+L +FK+L+ PY  FP+I  NRH E
Sbjct: 28  HHPSSTVQVATATTMSDDETRPHPSLEVIGGARDTFLPIFKTLHRPYKTFPLIGHNRHFE 87

Query: 255 TIFAS 269
           TIFAS
Sbjct: 88  TIFAS 92


>emb|CBI34585.3| unnamed protein product [Vitis vinifera]
          Length = 386

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 25/41 (60%), Positives = 33/41 (80%)
 Frame = +3

Query: 147 TLELTGGARDTYLSVFKSLNLPYNPFPIICWNRHLETIFAS 269
           +LE+ GG  D+YL  FK+LN PY+ FP++ WNRH+ETIFAS
Sbjct: 12  SLEVLGGGLDSYLPAFKTLNRPYDAFPVVGWNRHVETIFAS 52


>ref|XP_002280182.1| PREDICTED: embryogenesis-associated protein EMB8 [Vitis vinifera]
          Length = 424

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 25/41 (60%), Positives = 33/41 (80%)
 Frame = +3

Query: 147 TLELTGGARDTYLSVFKSLNLPYNPFPIICWNRHLETIFAS 269
           +LE+ GG  D+YL  FK+LN PY+ FP++ WNRH+ETIFAS
Sbjct: 50  SLEVLGGGLDSYLPAFKTLNRPYDAFPVVGWNRHVETIFAS 90


>ref|XP_004143840.1| PREDICTED: embryogenesis-associated protein EMB8-like [Cucumis
           sativus]
          Length = 480

 Score = 57.0 bits (136), Expect(2) = 1e-06
 Identities = 26/41 (63%), Positives = 31/41 (75%)
 Frame = +3

Query: 147 TLELTGGARDTYLSVFKSLNLPYNPFPIICWNRHLETIFAS 269
           +LE+ GG  D +L  FK L+LPY PFP+I  NRHLETIFAS
Sbjct: 115 SLEVIGGGCDQFLPAFKDLDLPYKPFPVIGSNRHLETIFAS 155



 Score = 20.4 bits (41), Expect(2) = 1e-06
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = +2

Query: 56  PQNSPSFQLHSSKKTPPFSSHNQ 124
           P +SP   L  S  TP F   NQ
Sbjct: 64  PSSSPLIALRLSSFTPSFFLTNQ 86


>ref|XP_004163575.1| PREDICTED: embryogenesis-associated protein EMB8-like [Cucumis
           sativus]
          Length = 372

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/41 (63%), Positives = 31/41 (75%)
 Frame = +3

Query: 147 TLELTGGARDTYLSVFKSLNLPYNPFPIICWNRHLETIFAS 269
           +LE+ GG  D +L  FK L+LPY PFP+I  NRHLETIFAS
Sbjct: 15  SLEVIGGGCDQFLPAFKDLDLPYKPFPVIGSNRHLETIFAS 55


Top