BLASTX nr result

ID: Coptis25_contig00043389 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043389
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279812.2| PREDICTED: calcium-binding protein CML37 [Vi...    95   7e-18
emb|CBI15642.3| unnamed protein product [Vitis vinifera]               95   7e-18
emb|CAN81786.1| hypothetical protein VITISV_026005 [Vitis vinifera]    95   7e-18
emb|CBI40801.3| unnamed protein product [Vitis vinifera]               94   1e-17
ref|XP_002277499.1| PREDICTED: calcium-binding protein CML37 [Vi...    94   1e-17

>ref|XP_002279812.2| PREDICTED: calcium-binding protein CML37 [Vitis vinifera]
          Length = 190

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 46/69 (66%), Positives = 56/69 (81%)
 Frame = -1

Query: 215 GEEEKMKDLKEAFGMYAMDGGEGITPWSLQRMLNRLDELKTIDECTVMISHFDLNCDGVL 36
           GEEEKM +L+EAFGMY MDG   ITP SL+RML+RL + K++DEC VMI+ FDLN DGVL
Sbjct: 121 GEEEKMNELREAFGMYDMDGCGFITPKSLKRMLSRLGQKKSVDECRVMINQFDLNGDGVL 180

Query: 35  HFEEFVIMM 9
            F+EF +MM
Sbjct: 181 SFDEFKVMM 189


>emb|CBI15642.3| unnamed protein product [Vitis vinifera]
          Length = 143

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 46/69 (66%), Positives = 56/69 (81%)
 Frame = -1

Query: 215 GEEEKMKDLKEAFGMYAMDGGEGITPWSLQRMLNRLDELKTIDECTVMISHFDLNCDGVL 36
           GEEEKM +L+EAFGMY MDG   ITP SL+RML+RL + K++DEC VMI+ FDLN DGVL
Sbjct: 74  GEEEKMNELREAFGMYDMDGCGFITPKSLKRMLSRLGQKKSVDECRVMINQFDLNGDGVL 133

Query: 35  HFEEFVIMM 9
            F+EF +MM
Sbjct: 134 SFDEFKVMM 142


>emb|CAN81786.1| hypothetical protein VITISV_026005 [Vitis vinifera]
          Length = 212

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 46/69 (66%), Positives = 56/69 (81%)
 Frame = -1

Query: 215 GEEEKMKDLKEAFGMYAMDGGEGITPWSLQRMLNRLDELKTIDECTVMISHFDLNCDGVL 36
           GEEEKM +L+EAFGMY MDG   ITP SL+RML+RL + K++DEC VMI+ FDLN DGVL
Sbjct: 143 GEEEKMNELREAFGMYDMDGCGFITPKSLKRMLSRLGQKKSVDECRVMINQFDLNGDGVL 202

Query: 35  HFEEFVIMM 9
            F+EF +MM
Sbjct: 203 SFDEFKVMM 211


>emb|CBI40801.3| unnamed protein product [Vitis vinifera]
          Length = 205

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 54/107 (50%), Positives = 66/107 (61%), Gaps = 1/107 (0%)
 Frame = -1

Query: 323 GDEISPKEVEDIVYXXXXXXXXXXXXXXXXXXVKSTGEEE-KMKDLKEAFGMYAMDGGEG 147
           G E+S KE E  V                   +++ GEEE K KDLKEAFGMY M+G   
Sbjct: 99  GGELSAKEAEAAVKSSDMDGDGMLGMEDFEMLMEANGEEEEKTKDLKEAFGMYEMEGSGC 158

Query: 146 ITPWSLQRMLNRLDELKTIDECTVMISHFDLNCDGVLHFEEFVIMMQ 6
           ITP SL+R+L+RL E KTI++C VMI  FD+N DGVL FEEF  MM+
Sbjct: 159 ITPKSLKRVLSRLGESKTIEDCKVMIHMFDINGDGVLSFEEFSAMMR 205


>ref|XP_002277499.1| PREDICTED: calcium-binding protein CML37 [Vitis vinifera]
          Length = 168

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 54/107 (50%), Positives = 66/107 (61%), Gaps = 1/107 (0%)
 Frame = -1

Query: 323 GDEISPKEVEDIVYXXXXXXXXXXXXXXXXXXVKSTGEEE-KMKDLKEAFGMYAMDGGEG 147
           G E+S KE E  V                   +++ GEEE K KDLKEAFGMY M+G   
Sbjct: 62  GGELSAKEAEAAVKSSDMDGDGMLGMEDFEMLMEANGEEEEKTKDLKEAFGMYEMEGSGC 121

Query: 146 ITPWSLQRMLNRLDELKTIDECTVMISHFDLNCDGVLHFEEFVIMMQ 6
           ITP SL+R+L+RL E KTI++C VMI  FD+N DGVL FEEF  MM+
Sbjct: 122 ITPKSLKRVLSRLGESKTIEDCKVMIHMFDINGDGVLSFEEFSAMMR 168


Top