BLASTX nr result

ID: Coptis25_contig00043362 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043362
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO26691.1|AF478379_1 gag-pol polyprotein [Vitis vinifera]          86   4e-15
gb|ABY49842.1| hypothetical protein [Vitis hybrid cultivar]            86   4e-15
emb|CAN63534.1| hypothetical protein VITISV_001206 [Vitis vinifera]    86   4e-15
emb|CAN74438.1| hypothetical protein VITISV_022954 [Vitis vinifera]    86   4e-15
emb|CAN65144.1| hypothetical protein VITISV_026080 [Vitis vinifera]    86   4e-15

>gb|AAO26691.1|AF478379_1 gag-pol polyprotein [Vitis vinifera]
          Length = 450

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 37/83 (44%), Positives = 58/83 (69%)
 Frame = +1

Query: 19  IILVDGSSRLVLGTGVLQPTKNLTLTFGLYVPTFPFNLLSMSQLTKSMNCSITFTPTSCV 198
           + + DGS+  + G+G ++PT ++TL+  L +P   FNL+S+S+LTK++NCS++F P  CV
Sbjct: 280 VTVADGSTYEIKGSGTVKPTSSITLSSVLNLPNLAFNLISVSKLTKNLNCSVSFFPDHCV 339

Query: 199 FQDFTTRTVIGSGNEKNGLYYLD 267
           FQD  T+   G G+  +GLY LD
Sbjct: 340 FQDLMTKRTFGKGHVSDGLYILD 362


>gb|ABY49842.1| hypothetical protein [Vitis hybrid cultivar]
          Length = 1382

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 37/83 (44%), Positives = 58/83 (69%)
 Frame = +1

Query: 19  IILVDGSSRLVLGTGVLQPTKNLTLTFGLYVPTFPFNLLSMSQLTKSMNCSITFTPTSCV 198
           + + DGS+  + G+G ++PT ++TL+  L +P   FNL+S+S+LTK++NCS++F P  CV
Sbjct: 360 VTVADGSTYEIKGSGTVKPTSSITLSSVLNLPNLAFNLISVSKLTKNLNCSVSFFPDHCV 419

Query: 199 FQDFTTRTVIGSGNEKNGLYYLD 267
           FQD  T+   G G+  +GLY LD
Sbjct: 420 FQDLMTKRTFGKGHVSDGLYILD 442


>emb|CAN63534.1| hypothetical protein VITISV_001206 [Vitis vinifera]
          Length = 1189

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 37/83 (44%), Positives = 58/83 (69%)
 Frame = +1

Query: 19  IILVDGSSRLVLGTGVLQPTKNLTLTFGLYVPTFPFNLLSMSQLTKSMNCSITFTPTSCV 198
           + + DGS+  + G+G ++PT ++TL+  L +P   FNL+S+S+LTK++NCS++F P  CV
Sbjct: 360 VTVADGSTYEIKGSGTVKPTSSITLSSVLNLPNLAFNLISVSKLTKNLNCSVSFFPDHCV 419

Query: 199 FQDFTTRTVIGSGNEKNGLYYLD 267
           FQD  T+   G G+  +GLY LD
Sbjct: 420 FQDLMTKRTFGKGHVSDGLYILD 442


>emb|CAN74438.1| hypothetical protein VITISV_022954 [Vitis vinifera]
          Length = 462

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 37/83 (44%), Positives = 58/83 (69%)
 Frame = +1

Query: 19  IILVDGSSRLVLGTGVLQPTKNLTLTFGLYVPTFPFNLLSMSQLTKSMNCSITFTPTSCV 198
           + + DGS+  + G+G ++PT ++TL+  L +P   FNL+S+S+LTK++NCS++F P  CV
Sbjct: 303 VTVADGSTYEIKGSGTVKPTSSITLSSVLNLPNLAFNLISVSKLTKNLNCSVSFFPDHCV 362

Query: 199 FQDFTTRTVIGSGNEKNGLYYLD 267
           FQD  T+   G G+  +GLY LD
Sbjct: 363 FQDLMTKRTFGKGHVSDGLYILD 385


>emb|CAN65144.1| hypothetical protein VITISV_026080 [Vitis vinifera]
          Length = 1220

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 37/83 (44%), Positives = 58/83 (69%)
 Frame = +1

Query: 19  IILVDGSSRLVLGTGVLQPTKNLTLTFGLYVPTFPFNLLSMSQLTKSMNCSITFTPTSCV 198
           + + DGS+  + G+G ++PT ++TL+  L +P   FNL+S+S+LTK++NCS++F P  CV
Sbjct: 337 VTVADGSTYEIKGSGTVKPTSSITLSSVLNLPNLAFNLISVSKLTKNLNCSVSFFPDHCV 396

Query: 199 FQDFTTRTVIGSGNEKNGLYYLD 267
           FQD  T+   G G+  +GLY LD
Sbjct: 397 FQDLMTKRTFGKGHVSDGLYILD 419


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