BLASTX nr result
ID: Coptis25_contig00043346
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00043346 (245 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003602712.1| hypothetical protein MTR_3g098230 [Medicago ... 94 1e-17 ref|XP_002518010.1| pentatricopeptide repeat-containing protein,... 91 1e-16 ref|XP_003528082.1| PREDICTED: putative pentatricopeptide repeat... 90 2e-16 ref|XP_002306009.1| predicted protein [Populus trichocarpa] gi|2... 88 8e-16 emb|CAN78103.1| hypothetical protein VITISV_043511 [Vitis vinifera] 87 1e-15 >ref|XP_003602712.1| hypothetical protein MTR_3g098230 [Medicago truncatula] gi|355491760|gb|AES72963.1| hypothetical protein MTR_3g098230 [Medicago truncatula] Length = 867 Score = 94.0 bits (232), Expect = 1e-17 Identities = 48/84 (57%), Positives = 60/84 (71%), Gaps = 3/84 (3%) Frame = +3 Query: 3 HIQFFELVSQMLEEGIRPDSITILAVLHVVPS---VKLVKETHGYSLRAALLLNCQEPTV 173 H +F L+ ML+ IRPDS+TIL ++H S VK VKE HGYS+R+ LL PTV Sbjct: 431 HSRFLSLLHVMLKLDIRPDSVTILTIIHFCASLLRVKKVKEIHGYSIRSGSLLCATAPTV 490 Query: 174 GNAILDAYAKCGNMEYALKTFESL 245 GNAILDAY+KCGN+EYA K F++L Sbjct: 491 GNAILDAYSKCGNIEYANKMFQNL 514 Score = 55.5 bits (132), Expect = 4e-06 Identities = 29/81 (35%), Positives = 52/81 (64%), Gaps = 3/81 (3%) Frame = +3 Query: 9 QFFELVSQMLEEGIRPDSITILAVLHV---VPSVKLVKETHGYSLRAALLLNCQEPTVGN 179 Q EL ++ +G++PD +TI++++ V + SV L+++ HGY +R++ ++ + Sbjct: 569 QALELFLKLQTQGMKPDVVTIMSLIPVCTQMASVHLLRQCHGYIIRSSF----EDLHLKG 624 Query: 180 AILDAYAKCGNMEYALKTFES 242 +LDAYAKCG + YA K F+S Sbjct: 625 TLLDAYAKCGIIGYAYKIFQS 645 >ref|XP_002518010.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223542992|gb|EEF44528.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 824 Score = 90.9 bits (224), Expect = 1e-16 Identities = 49/82 (59%), Positives = 57/82 (69%), Gaps = 3/82 (3%) Frame = +3 Query: 9 QFFELVSQMLEEGIRPDSITILAVLHV---VPSVKLVKETHGYSLRAALLLNCQEPTVGN 179 QFF+L+ M EGIRPDSITIL +LH V V VKETH YSLR LL + EPT N Sbjct: 370 QFFKLLHWMHTEGIRPDSITILTILHFCANVLKVDKVKETHCYSLRCGLLQSDFEPTTRN 429 Query: 180 AILDAYAKCGNMEYALKTFESL 245 A+LD YAKC N+EYA K F++L Sbjct: 430 AMLDTYAKCSNVEYAFKVFQTL 451 Score = 58.2 bits (139), Expect = 7e-07 Identities = 31/81 (38%), Positives = 48/81 (59%), Gaps = 3/81 (3%) Frame = +3 Query: 9 QFFELVSQMLEEGIRPDSITILAVLHV---VPSVKLVKETHGYSLRAALLLNCQEPTVGN 179 Q F L ++ G++PD++TI+++L SV L+K+ HGY +RA + + Sbjct: 506 QAFSLFRELQARGMKPDAVTIISLLPSCAQTASVHLMKQCHGYVIRACF----DDAHLEG 561 Query: 180 AILDAYAKCGNMEYALKTFES 242 A+LD YAKCG++ YA K F S Sbjct: 562 ALLDLYAKCGDLGYAFKLFHS 582 >ref|XP_003528082.1| PREDICTED: putative pentatricopeptide repeat-containing protein At5g08490-like [Glycine max] Length = 875 Score = 90.1 bits (222), Expect = 2e-16 Identities = 47/84 (55%), Positives = 60/84 (71%), Gaps = 3/84 (3%) Frame = +3 Query: 3 HIQFFELVSQMLEEGIRPDSITILAVLHVVPS---VKLVKETHGYSLRAALLLNCQEPTV 173 H +F L+ ML+ IRPDS+TILA++ + S V+ VKE H YS+R LL+ PTV Sbjct: 437 HSRFLSLLHCMLKLRIRPDSVTILAIIRLCASLLRVEKVKEIHSYSIRTGSLLSNTAPTV 496 Query: 174 GNAILDAYAKCGNMEYALKTFESL 245 GNAILDAY+KCGNMEYA K F++L Sbjct: 497 GNAILDAYSKCGNMEYANKMFQNL 520 >ref|XP_002306009.1| predicted protein [Populus trichocarpa] gi|222848973|gb|EEE86520.1| predicted protein [Populus trichocarpa] Length = 870 Score = 87.8 bits (216), Expect = 8e-16 Identities = 48/83 (57%), Positives = 58/83 (69%), Gaps = 5/83 (6%) Frame = +3 Query: 12 FFELVSQMLEEGIRPDSITILAVLHVVPSV---KLVKETHGYSLRAALLLNC--QEPTVG 176 F EL+ ML EG PDS+TIL+V+H +V VKE H YS+R LL + EPT+G Sbjct: 424 FLELLRWMLSEGTTPDSVTILSVVHFCVNVLKEDKVKEAHSYSIRHRLLASKFDVEPTIG 483 Query: 177 NAILDAYAKCGNMEYALKTFESL 245 NAILDAYAKCGN+EYA K F+SL Sbjct: 484 NAILDAYAKCGNIEYASKVFQSL 506 Score = 54.7 bits (130), Expect = 8e-06 Identities = 28/80 (35%), Positives = 49/80 (61%), Gaps = 3/80 (3%) Frame = +3 Query: 9 QFFELVSQMLEEGIRPDSITILAVLHV---VPSVKLVKETHGYSLRAALLLNCQEPTVGN 179 Q L ++ GI+PD++TI+++L + SV+L+K+ HGY++R+ + + Sbjct: 561 QALGLFHELQAHGIKPDAVTIMSLLPACAEMASVQLIKQCHGYAIRSCF----GDLHLDG 616 Query: 180 AILDAYAKCGNMEYALKTFE 239 A+ D YAKCG++ YA K F+ Sbjct: 617 ALQDVYAKCGSIGYAFKLFQ 636 >emb|CAN78103.1| hypothetical protein VITISV_043511 [Vitis vinifera] Length = 1849 Score = 87.4 bits (215), Expect = 1e-15 Identities = 46/78 (58%), Positives = 54/78 (69%), Gaps = 3/78 (3%) Frame = +3 Query: 21 LVSQMLEEGIRPDSITILAVLH---VVPSVKLVKETHGYSLRAALLLNCQEPTVGNAILD 191 L+ ML EGIRPDSITIL ++ V VK VKETH YS+R LL PT+GN +LD Sbjct: 1370 LLHWMLREGIRPDSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGDAXPTLGNGMLD 1429 Query: 192 AYAKCGNMEYALKTFESL 245 AYAKCGNM+YA+ F SL Sbjct: 1430 AYAKCGNMKYAVNIFGSL 1447