BLASTX nr result

ID: Coptis25_contig00043333 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043333
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327371.1| amino acid permease [Populus trichocarpa] gi...   118   4e-25
ref|XP_002280128.1| PREDICTED: amino acid permease 2-like [Vitis...   113   2e-23
emb|CBI39290.3| unnamed protein product [Vitis vinifera]              113   2e-23
emb|CAN78273.1| hypothetical protein VITISV_006715 [Vitis vinifera]   113   2e-23
gb|AFW84400.1| hypothetical protein ZEAMMB73_110286 [Zea mays]        105   3e-21

>ref|XP_002327371.1| amino acid permease [Populus trichocarpa]
           gi|222835741|gb|EEE74176.1| amino acid permease [Populus
           trichocarpa]
          Length = 460

 Score =  118 bits (296), Expect = 4e-25
 Identities = 53/91 (58%), Positives = 70/91 (76%)
 Frame = -2

Query: 273 NLSVIIHLIAAYQVFAQPIYSIQEKWLALKWPNKGFFNNVYTWRLPCTKGPKFQFTLAKL 94
           N++VIIHLI AYQV+AQP+++I EKW+  +WP   F N +YT R PC++      T+ +L
Sbjct: 306 NIAVIIHLIGAYQVYAQPLFAINEKWIGSRWPTSSF-NKIYTIRFPCSRKGSLHLTINRL 364

Query: 93  FLRPAFVIFTTFVAMMFPFFNAIVGLLGAMS 1
           FLRP FV+ TT VAMMFPFFNAI+GLLG++S
Sbjct: 365 FLRPIFVVITTAVAMMFPFFNAILGLLGSVS 395


>ref|XP_002280128.1| PREDICTED: amino acid permease 2-like [Vitis vinifera]
          Length = 459

 Score =  113 bits (282), Expect = 2e-23
 Identities = 52/91 (57%), Positives = 68/91 (74%)
 Frame = -2

Query: 273 NLSVIIHLIAAYQVFAQPIYSIQEKWLALKWPNKGFFNNVYTWRLPCTKGPKFQFTLAKL 94
           N +VIIHL  ++QVFAQPI+++ EKW+A +WP   FF +VYT +LP  +   FQFTL KL
Sbjct: 304 NFAVIIHLSGSFQVFAQPIFTVYEKWIASRWPPTSFFLHVYTIKLPFPRPCLFQFTLCKL 363

Query: 93  FLRPAFVIFTTFVAMMFPFFNAIVGLLGAMS 1
            LR  F+I TT +AMM PFFNA++G LGA+S
Sbjct: 364 LLRTLFIILTTTIAMMLPFFNAVLGFLGAIS 394


>emb|CBI39290.3| unnamed protein product [Vitis vinifera]
          Length = 455

 Score =  113 bits (282), Expect = 2e-23
 Identities = 52/91 (57%), Positives = 68/91 (74%)
 Frame = -2

Query: 273 NLSVIIHLIAAYQVFAQPIYSIQEKWLALKWPNKGFFNNVYTWRLPCTKGPKFQFTLAKL 94
           N +VIIHL  ++QVFAQPI+++ EKW+A +WP   FF +VYT +LP  +   FQFTL KL
Sbjct: 300 NFAVIIHLSGSFQVFAQPIFTVYEKWIASRWPPTSFFLHVYTIKLPFPRPCLFQFTLCKL 359

Query: 93  FLRPAFVIFTTFVAMMFPFFNAIVGLLGAMS 1
            LR  F+I TT +AMM PFFNA++G LGA+S
Sbjct: 360 LLRTLFIILTTTIAMMLPFFNAVLGFLGAIS 390


>emb|CAN78273.1| hypothetical protein VITISV_006715 [Vitis vinifera]
          Length = 424

 Score =  113 bits (282), Expect = 2e-23
 Identities = 52/91 (57%), Positives = 68/91 (74%)
 Frame = -2

Query: 273 NLSVIIHLIAAYQVFAQPIYSIQEKWLALKWPNKGFFNNVYTWRLPCTKGPKFQFTLAKL 94
           N +VIIHL  ++QVFAQPI+++ EKW+A +WP   FF +VYT +LP  +   FQFTL KL
Sbjct: 269 NFAVIIHLSGSFQVFAQPIFTVYEKWIASRWPPTSFFLHVYTIKLPFPRPCLFQFTLCKL 328

Query: 93  FLRPAFVIFTTFVAMMFPFFNAIVGLLGAMS 1
            LR  F+I TT +AMM PFFNA++G LGA+S
Sbjct: 329 LLRTLFIILTTTIAMMLPFFNAVLGFLGAIS 359


>gb|AFW84400.1| hypothetical protein ZEAMMB73_110286 [Zea mays]
          Length = 415

 Score =  105 bits (263), Expect = 3e-21
 Identities = 48/91 (52%), Positives = 68/91 (74%)
 Frame = -2

Query: 273 NLSVIIHLIAAYQVFAQPIYSIQEKWLALKWPNKGFFNNVYTWRLPCTKGPKFQFTLAKL 94
           N++V++HL+ AYQV+AQPI++  EKWL  +WP+  FF++ Y  RLP   G   +FT+ KL
Sbjct: 263 NIAVVVHLVGAYQVYAQPIFACYEKWLGSRWPDSAFFHHEYAVRLP---GCAVRFTMCKL 319

Query: 93  FLRPAFVIFTTFVAMMFPFFNAIVGLLGAMS 1
            LR AFV  TT V++M PFFNA++GLLGA++
Sbjct: 320 VLRTAFVAATTVVSLMLPFFNAVLGLLGAIA 350


Top