BLASTX nr result
ID: Coptis25_contig00043328
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00043328 (359 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_187359.2| Alba DNA/RNA-binding protein [Arabidopsis thali... 80 1e-13 gb|AAF27007.1|AC016827_18 unknown protein [Arabidopsis thaliana] 80 1e-13 ref|XP_002884621.1| predicted protein [Arabidopsis lyrata subsp.... 79 3e-13 ref|XP_004152021.1| PREDICTED: uncharacterized protein LOC101208... 79 4e-13 ref|XP_004171609.1| PREDICTED: ribonuclease P protein subunit p2... 77 1e-12 >ref|NP_187359.2| Alba DNA/RNA-binding protein [Arabidopsis thaliana] gi|332640970|gb|AEE74491.1| Alba DNA/RNA-binding protein [Arabidopsis thaliana] Length = 405 Score = 80.5 bits (197), Expect = 1e-13 Identities = 44/95 (46%), Positives = 62/95 (65%), Gaps = 1/95 (1%) Frame = -1 Query: 284 KPKLKPVIRDNEMRIRKDVTLLDYIESASRYLKNRS-KTIVIKAMGVNLSRALDVSEALR 108 KPK + I +NE+RI + +YI A+ L+ +S K IV+KAMG +S+ + +SE L+ Sbjct: 9 KPKPESPINENEIRITSKGLIRNYISYATSLLQEKSVKDIVLKAMGQAISKTVAISEILK 68 Query: 107 GNISGLNQEIATSSDYVVDVWEPVEEGLDPVKTWR 3 I GL+Q+IA SS + DVWEP EEGL PV+ R Sbjct: 69 NKIPGLHQDIAISSISITDVWEPTEEGLFPVELTR 103 >gb|AAF27007.1|AC016827_18 unknown protein [Arabidopsis thaliana] Length = 485 Score = 80.5 bits (197), Expect = 1e-13 Identities = 44/95 (46%), Positives = 62/95 (65%), Gaps = 1/95 (1%) Frame = -1 Query: 284 KPKLKPVIRDNEMRIRKDVTLLDYIESASRYLKNRS-KTIVIKAMGVNLSRALDVSEALR 108 KPK + I +NE+RI + +YI A+ L+ +S K IV+KAMG +S+ + +SE L+ Sbjct: 9 KPKPESPINENEIRITSKGLIRNYISYATSLLQEKSVKDIVLKAMGQAISKTVAISEILK 68 Query: 107 GNISGLNQEIATSSDYVVDVWEPVEEGLDPVKTWR 3 I GL+Q+IA SS + DVWEP EEGL PV+ R Sbjct: 69 NKIPGLHQDIAISSISITDVWEPTEEGLFPVELTR 103 >ref|XP_002884621.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297330461|gb|EFH60880.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 413 Score = 79.3 bits (194), Expect = 3e-13 Identities = 43/95 (45%), Positives = 62/95 (65%), Gaps = 1/95 (1%) Frame = -1 Query: 284 KPKLKPVIRDNEMRIRKDVTLLDYIESASRYLKNRS-KTIVIKAMGVNLSRALDVSEALR 108 KPK + I +NE+RI + +YI A+ L+ ++ K IV+KAMG +S+ + +SE L+ Sbjct: 9 KPKPESPINENEIRITSKGLIRNYISYATTLLQEKNVKDIVLKAMGQAISKTVAISEILK 68 Query: 107 GNISGLNQEIATSSDYVVDVWEPVEEGLDPVKTWR 3 I GL+Q+IA SS + DVWEP EEGL PV+ R Sbjct: 69 NKIPGLHQDIAISSMSITDVWEPTEEGLFPVELTR 103 >ref|XP_004152021.1| PREDICTED: uncharacterized protein LOC101208913 [Cucumis sativus] gi|449531416|ref|XP_004172682.1| PREDICTED: uncharacterized protein LOC101224898 [Cucumis sativus] Length = 287 Score = 79.0 bits (193), Expect = 4e-13 Identities = 45/99 (45%), Positives = 64/99 (64%), Gaps = 1/99 (1%) Frame = -1 Query: 296 KKQFKPKLKPVIRDNEMRIRKDVTLLDYIESASRYLKN-RSKTIVIKAMGVNLSRALDVS 120 +K KPK + I +NE+RI + +YI AS L+ R + IV+KAMG +S+A+ ++ Sbjct: 5 QKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKAVAIA 64 Query: 119 EALRGNISGLNQEIATSSDYVVDVWEPVEEGLDPVKTWR 3 E L+ IS L+QE A SS + DVWEP+EEGL PV+ R Sbjct: 65 EILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTR 103 >ref|XP_004171609.1| PREDICTED: ribonuclease P protein subunit p25-like protein-like, partial [Cucumis sativus] Length = 230 Score = 77.0 bits (188), Expect = 1e-12 Identities = 43/99 (43%), Positives = 64/99 (64%), Gaps = 1/99 (1%) Frame = -1 Query: 296 KKQFKPKLKPVIRDNEMRIRKDVTLLDYIESASRYLKNRS-KTIVIKAMGVNLSRALDVS 120 +K KPK + I +NE+RI + +YI AS L+ + + IV+KAMG +S+A+ ++ Sbjct: 5 QKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKCVREIVLKAMGQAISKAVAIA 64 Query: 119 EALRGNISGLNQEIATSSDYVVDVWEPVEEGLDPVKTWR 3 E L+ IS L+QE A SS + DVWEP+EEGL P++ R Sbjct: 65 EILKKRISRLHQETAISSVSITDVWEPIEEGLVPMEMTR 103