BLASTX nr result

ID: Coptis25_contig00043307 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043307
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276048.1| PREDICTED: probable UDP-N-acetylglucosamine ...    69   4e-10
ref|XP_002326445.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_003531103.1| PREDICTED: probable UDP-N-acetylglucosamine ...    64   1e-08
ref|XP_003524811.1| PREDICTED: probable UDP-N-acetylglucosamine ...    64   1e-08
gb|AFK36352.1| unknown [Medicago truncatula]                           64   1e-08

>ref|XP_002276048.1| PREDICTED: probable UDP-N-acetylglucosamine pyrophosphorylase
           [Vitis vinifera] gi|297738002|emb|CBI27203.3| unnamed
           protein product [Vitis vinifera]
          Length = 485

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 39/69 (56%), Positives = 42/69 (60%)
 Frame = +3

Query: 84  QVAKAPDGNGGVYSGRHFINHF*LWMLFYFFLV*SSCFESALKASRLLEDMAMRGVRYLD 263
           +VAKAPDGNGGVYS                          ALK+SRLLEDMA RGV+YLD
Sbjct: 225 KVAKAPDGNGGVYS--------------------------ALKSSRLLEDMATRGVKYLD 258

Query: 264 CYGVDNALV 290
           CYGVDNALV
Sbjct: 259 CYGVDNALV 267


>ref|XP_002326445.1| predicted protein [Populus trichocarpa] gi|222833767|gb|EEE72244.1|
           predicted protein [Populus trichocarpa]
          Length = 486

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 37/69 (53%), Positives = 41/69 (59%)
 Frame = +3

Query: 84  QVAKAPDGNGGVYSGRHFINHF*LWMLFYFFLV*SSCFESALKASRLLEDMAMRGVRYLD 263
           +VAKAPDGNGGVYS                          ALK S+LLEDMA RG++YLD
Sbjct: 226 KVAKAPDGNGGVYS--------------------------ALKYSKLLEDMASRGIKYLD 259

Query: 264 CYGVDNALV 290
           CYGVDNALV
Sbjct: 260 CYGVDNALV 268


>ref|XP_003531103.1| PREDICTED: probable UDP-N-acetylglucosamine pyrophosphorylase-like
           [Glycine max]
          Length = 490

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 34/69 (49%), Positives = 42/69 (60%)
 Frame = +3

Query: 84  QVAKAPDGNGGVYSGRHFINHF*LWMLFYFFLV*SSCFESALKASRLLEDMAMRGVRYLD 263
           +VAKAPDGNGGVYS                          ALK+++LLEDMA +G++Y+D
Sbjct: 230 RVAKAPDGNGGVYS--------------------------ALKSTKLLEDMASKGIKYID 263

Query: 264 CYGVDNALV 290
           CYGVDNALV
Sbjct: 264 CYGVDNALV 272


>ref|XP_003524811.1| PREDICTED: probable UDP-N-acetylglucosamine pyrophosphorylase-like
           [Glycine max]
          Length = 490

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 34/69 (49%), Positives = 42/69 (60%)
 Frame = +3

Query: 84  QVAKAPDGNGGVYSGRHFINHF*LWMLFYFFLV*SSCFESALKASRLLEDMAMRGVRYLD 263
           +VAKAPDGNGGVYS                          ALK+++LLEDMA +G++Y+D
Sbjct: 230 RVAKAPDGNGGVYS--------------------------ALKSTKLLEDMASKGIKYID 263

Query: 264 CYGVDNALV 290
           CYGVDNALV
Sbjct: 264 CYGVDNALV 272


>gb|AFK36352.1| unknown [Medicago truncatula]
          Length = 274

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 34/69 (49%), Positives = 42/69 (60%)
 Frame = +3

Query: 84  QVAKAPDGNGGVYSGRHFINHF*LWMLFYFFLV*SSCFESALKASRLLEDMAMRGVRYLD 263
           +VAKAPDGNGGVYS                          ALK+++LLEDMA +G++Y+D
Sbjct: 232 RVAKAPDGNGGVYS--------------------------ALKSTKLLEDMASKGIKYVD 265

Query: 264 CYGVDNALV 290
           CYGVDNALV
Sbjct: 266 CYGVDNALV 274


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