BLASTX nr result

ID: Coptis25_contig00043306 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043306
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268761.2| PREDICTED: LOW QUALITY PROTEIN: protein PHYL...   154   9e-36
emb|CBI27422.3| unnamed protein product [Vitis vinifera]              154   9e-36
ref|XP_004155371.1| PREDICTED: protein PHYLLO, chloroplastic-lik...   150   8e-35
ref|XP_004135420.1| PREDICTED: protein PHYLLO, chloroplastic-lik...   150   8e-35
ref|XP_002314907.1| predicted protein [Populus trichocarpa] gi|2...   145   3e-33

>ref|XP_002268761.2| PREDICTED: LOW QUALITY PROTEIN: protein PHYLLO, chloroplastic-like
           [Vitis vinifera]
          Length = 1614

 Score =  154 bits (388), Expect = 9e-36
 Identities = 76/116 (65%), Positives = 89/116 (76%)
 Frame = -2

Query: 378 CSPCTYIMVDKHPYRHDPSHIVTHRIQSTIIEFADFLSKVQLPRISCKWSGHMQALNMMV 199
           C PC+YIMVDKHP RHDPSH++THRIQSTI +FAD L K Q P +S KWS  ++AL+MMV
Sbjct: 575 CFPCSYIMVDKHPCRHDPSHLLTHRIQSTITQFADCLCKAQFPLMSSKWSVSLRALDMMV 634

Query: 198 AREIEFQIHSEYSLTEPHVAQVISEALPSDAALFFGNSMVIRDADMYGRGWMNYTN 31
           A+EI   IHSE  LTEP+VA VI EAL  D+ALF GNSM IRDADMY R   + T+
Sbjct: 635 AQEISSLIHSESFLTEPYVAHVILEALTCDSALFIGNSMAIRDADMYARNSADCTH 690


>emb|CBI27422.3| unnamed protein product [Vitis vinifera]
          Length = 633

 Score =  154 bits (388), Expect = 9e-36
 Identities = 76/116 (65%), Positives = 89/116 (76%)
 Frame = -2

Query: 378 CSPCTYIMVDKHPYRHDPSHIVTHRIQSTIIEFADFLSKVQLPRISCKWSGHMQALNMMV 199
           C PC+YIMVDKHP RHDPSH++THRIQSTI +FAD L K Q P +S KWS  ++AL+MMV
Sbjct: 389 CFPCSYIMVDKHPCRHDPSHLLTHRIQSTITQFADCLCKAQFPLMSSKWSVSLRALDMMV 448

Query: 198 AREIEFQIHSEYSLTEPHVAQVISEALPSDAALFFGNSMVIRDADMYGRGWMNYTN 31
           A+EI   IHSE  LTEP+VA VI EAL  D+ALF GNSM IRDADMY R   + T+
Sbjct: 449 AQEISSLIHSESFLTEPYVAHVILEALTCDSALFIGNSMAIRDADMYARNSADCTH 504


>ref|XP_004155371.1| PREDICTED: protein PHYLLO, chloroplastic-like [Cucumis sativus]
          Length = 1794

 Score =  150 bits (380), Expect = 8e-35
 Identities = 76/118 (64%), Positives = 87/118 (73%)
 Frame = -2

Query: 378  CSPCTYIMVDKHPYRHDPSHIVTHRIQSTIIEFADFLSKVQLPRISCKWSGHMQALNMMV 199
            CSPC+YIMVDKHP RHDPSHIVTHRIQST++EF   L K   P    K +  ++ALNMMV
Sbjct: 745  CSPCSYIMVDKHPDRHDPSHIVTHRIQSTVLEFVGCLLKASFPLNKSKLTATLRALNMMV 804

Query: 198  AREIEFQIHSEYSLTEPHVAQVISEALPSDAALFFGNSMVIRDADMYGRGWMNYTNDS 25
              EI+FQI + YSL+EP VAQVISEAL  D+ LF GNSM IRD DMY  GW +  NDS
Sbjct: 805  EWEIQFQISAHYSLSEPEVAQVISEALSFDSVLFLGNSMPIRDVDMYAYGW-SKCNDS 861


>ref|XP_004135420.1| PREDICTED: protein PHYLLO, chloroplastic-like [Cucumis sativus]
          Length = 1794

 Score =  150 bits (380), Expect = 8e-35
 Identities = 76/118 (64%), Positives = 87/118 (73%)
 Frame = -2

Query: 378  CSPCTYIMVDKHPYRHDPSHIVTHRIQSTIIEFADFLSKVQLPRISCKWSGHMQALNMMV 199
            CSPC+YIMVDKHP RHDPSHIVTHRIQST++EF   L K   P    K +  ++ALNMMV
Sbjct: 745  CSPCSYIMVDKHPDRHDPSHIVTHRIQSTVLEFVGCLLKASFPLNKSKLTATLRALNMMV 804

Query: 198  AREIEFQIHSEYSLTEPHVAQVISEALPSDAALFFGNSMVIRDADMYGRGWMNYTNDS 25
              EI+FQI + YSL+EP VAQVISEAL  D+ LF GNSM IRD DMY  GW +  NDS
Sbjct: 805  EWEIQFQISAHYSLSEPEVAQVISEALSFDSVLFLGNSMPIRDVDMYAYGW-SKCNDS 861


>ref|XP_002314907.1| predicted protein [Populus trichocarpa] gi|222863947|gb|EEF01078.1|
           predicted protein [Populus trichocarpa]
          Length = 848

 Score =  145 bits (366), Expect = 3e-33
 Identities = 70/122 (57%), Positives = 87/122 (71%)
 Frame = -2

Query: 378 CSPCTYIMVDKHPYRHDPSHIVTHRIQSTIIEFADFLSKVQLPRISCKWSGHMQALNMMV 199
           C PCTYI+VD HP RHDPSH VTHR+Q +I +FAD L K Q    + KW   ++ LN MV
Sbjct: 614 CFPCTYILVDNHPCRHDPSHFVTHRVQCSIRQFADSLMKAQFSHRNSKWCCFLRVLNTMV 673

Query: 198 AREIEFQIHSEYSLTEPHVAQVISEALPSDAALFFGNSMVIRDADMYGRGWMNYTNDSTW 19
           A +I FQI++E SLTEPHVA VI+EAL +++ALF GNSMVIRDADMYG     + +    
Sbjct: 674 AWDISFQINAENSLTEPHVAHVITEALSAESALFVGNSMVIRDADMYGHNCKTHAHSIAH 733

Query: 18  IM 13
           +M
Sbjct: 734 MM 735


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