BLASTX nr result

ID: Coptis25_contig00043305 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043305
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003593782.1| Pyridoxal biosynthesis protein PDX1.3 [Medic...    58   9e-07
ref|XP_002879732.1| ATPDX1.1 [Arabidopsis lyrata subsp. lyrata] ...    58   9e-07
ref|NP_181358.1| Pyridoxal biosynthesis protein PDX1.1 [Arabidop...    58   9e-07
gb|AAZ67141.1| pyridoxine biosynthesis protein [Lotus japonicus]       57   2e-06
gb|AFN53699.1| hypothetical protein [Linum usitatissimum]              57   2e-06

>ref|XP_003593782.1| Pyridoxal biosynthesis protein PDX1.3 [Medicago truncatula]
           gi|72256515|gb|AAZ67140.1| pyridoxine biosynthesis
           protein [Medicago truncatula]
           gi|355482830|gb|AES64033.1| Pyridoxal biosynthesis
           protein PDX1.3 [Medicago truncatula]
          Length = 314

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/32 (84%), Positives = 29/32 (90%)
 Frame = +1

Query: 172 VFAPSLESIGIDYIDESEVLTLADEDNHINKH 267
           V A  LES+GIDY+DESEVLTLADEDNHINKH
Sbjct: 109 VEAQILESLGIDYVDESEVLTLADEDNHINKH 140


>ref|XP_002879732.1| ATPDX1.1 [Arabidopsis lyrata subsp. lyrata]
           gi|297325571|gb|EFH55991.1| ATPDX1.1 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 309

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 31/54 (57%), Positives = 37/54 (68%), Gaps = 7/54 (12%)
 Frame = +1

Query: 127 MIKDLTHRADI-------ILELVFAPSLESIGIDYIDESEVLTLADEDNHINKH 267
           MIK++ +   I       I   V A  LE+IG+DY+DESEVLTLADEDNHINKH
Sbjct: 83  MIKEIKNAVTIPVMAKARIGHFVEAQILEAIGVDYVDESEVLTLADEDNHINKH 136


>ref|NP_181358.1| Pyridoxal biosynthesis protein PDX1.1 [Arabidopsis thaliana]
           gi|45477177|sp|O80448.1|PDX11_ARATH RecName:
           Full=Pyridoxal biosynthesis protein PDX1.1; AltName:
           Full=HEVER-like protein; Short=AtPDX1.1; Short=AtPDX1;2
           gi|13878067|gb|AAK44111.1|AF370296_1 putative SOR1 from
           the fungus Cercospora nicotianae protein [Arabidopsis
           thaliana] gi|14326483|gb|AAK60287.1|AF385694_1
           At2g38230/F16M14.16 [Arabidopsis thaliana]
           gi|3335371|gb|AAC27172.1| similar to SOR1 from the
           fungus Cercospora nicotianae [Arabidopsis thaliana]
           gi|17104657|gb|AAL34217.1| putative SOR1 from the fungus
           Cercospora nicotianae protein [Arabidopsis thaliana]
           gi|330254417|gb|AEC09511.1| Pyridoxal biosynthesis
           protein PDX1.1 [Arabidopsis thaliana]
          Length = 309

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 31/54 (57%), Positives = 37/54 (68%), Gaps = 7/54 (12%)
 Frame = +1

Query: 127 MIKDLTHRADI-------ILELVFAPSLESIGIDYIDESEVLTLADEDNHINKH 267
           MIK++ +   I       I   V A  LE+IG+DY+DESEVLTLADEDNHINKH
Sbjct: 83  MIKEIKNAVTIPVMAKARIGHFVEAQILEAIGVDYVDESEVLTLADEDNHINKH 136


>gb|AAZ67141.1| pyridoxine biosynthesis protein [Lotus japonicus]
          Length = 310

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/32 (81%), Positives = 29/32 (90%)
 Frame = +1

Query: 172 VFAPSLESIGIDYIDESEVLTLADEDNHINKH 267
           V A  LE+IG+DY+DESEVLTLADEDNHINKH
Sbjct: 105 VEAQILEAIGVDYVDESEVLTLADEDNHINKH 136


>gb|AFN53699.1| hypothetical protein [Linum usitatissimum]
          Length = 801

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 27/32 (84%), Positives = 29/32 (90%)
 Frame = +1

Query: 172 VFAPSLESIGIDYIDESEVLTLADEDNHINKH 267
           V A  LE++GIDYIDESEVLTLADEDNHINKH
Sbjct: 106 VEAQILEALGIDYIDESEVLTLADEDNHINKH 137


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