BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043294
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001078482.1| DNA polymerase theta subunit [Arabidopsis th...   186   2e-45
ref|XP_002869254.1| predicted protein [Arabidopsis lyrata subsp....   184   9e-45
ref|XP_002281624.2| PREDICTED: LOW QUALITY PROTEIN: DNA polymera...   183   1e-44
ref|XP_003545584.1| PREDICTED: DNA polymerase theta-like [Glycin...   182   3e-44
ref|XP_004168093.1| PREDICTED: DNA polymerase theta-like, partia...   180   1e-43

>ref|NP_001078482.1| DNA polymerase theta subunit [Arabidopsis thaliana]
           gi|62241195|dbj|BAD93700.1| helicase and polymerase
           containing protein TEBICHI [Arabidopsis thaliana]
           gi|332660705|gb|AEE86105.1| DNA polymerase theta subunit
           [Arabidopsis thaliana]
          Length = 2154

 Score =  186 bits (472), Expect = 2e-45
 Identities = 97/116 (83%), Positives = 101/116 (87%)
 Frame = -1

Query: 350 DTSVAVCTIEKANSLVNRLLEEGRLSEVGIIVIDELHMVGDQSRGYLLELMLTKLRYAAG 171
           DTSVAVCTIEKANSL+NRLLEEGRLSE+GIIVIDELHMVGDQ RGYLLELMLTKLRYAAG
Sbjct: 606 DTSVAVCTIEKANSLINRLLEEGRLSELGIIVIDELHMVGDQHRGYLLELMLTKLRYAAG 665

Query: 170 EGNLXXXXXXXXXXXXGKADPAQGLQIVGMSATMPNVGAVADWLRAALYQTEFRPV 3
           EG+             GKADPA GLQIVGMSATMPNVGAVADWL+AALYQTEFRPV
Sbjct: 666 EGSSESSSGESSGTSSGKADPAHGLQIVGMSATMPNVGAVADWLQAALYQTEFRPV 721


>ref|XP_002869254.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297315090|gb|EFH45513.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 2147

 Score =  184 bits (466), Expect = 9e-45
 Identities = 96/115 (83%), Positives = 100/115 (86%)
 Frame = -1

Query: 347 TSVAVCTIEKANSLVNRLLEEGRLSEVGIIVIDELHMVGDQSRGYLLELMLTKLRYAAGE 168
           TSVAVCTIEKANSL+NRLLEEGRLSE+GIIVIDELHMVGDQ RGYLLELMLTKLRYAAGE
Sbjct: 606 TSVAVCTIEKANSLINRLLEEGRLSELGIIVIDELHMVGDQHRGYLLELMLTKLRYAAGE 665

Query: 167 GNLXXXXXXXXXXXXGKADPAQGLQIVGMSATMPNVGAVADWLRAALYQTEFRPV 3
           G+             GKADPA GLQIVGMSATMPNVGAVADWL+AALYQTEFRPV
Sbjct: 666 GSSESSSGESSGNSSGKADPAHGLQIVGMSATMPNVGAVADWLQAALYQTEFRPV 720


>ref|XP_002281624.2| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase theta-like [Vitis
           vinifera]
          Length = 2181

 Score =  183 bits (464), Expect = 1e-44
 Identities = 93/116 (80%), Positives = 102/116 (87%)
 Frame = -1

Query: 350 DTSVAVCTIEKANSLVNRLLEEGRLSEVGIIVIDELHMVGDQSRGYLLELMLTKLRYAAG 171
           DTSVAVCTIEKANSL+NRLLEEGRLSE+GIIVIDELHMVGDQ+RGYLLEL+LTKLRYAAG
Sbjct: 615 DTSVAVCTIEKANSLINRLLEEGRLSEIGIIVIDELHMVGDQNRGYLLELLLTKLRYAAG 674

Query: 170 EGNLXXXXXXXXXXXXGKADPAQGLQIVGMSATMPNVGAVADWLRAALYQTEFRPV 3
           EG++            GK+DPA GLQIVGMSATMPNV AVADWL+AALYQT+FRPV
Sbjct: 675 EGHVESVSGESSNMSSGKSDPAHGLQIVGMSATMPNVAAVADWLQAALYQTDFRPV 730


>ref|XP_003545584.1| PREDICTED: DNA polymerase theta-like [Glycine max]
          Length = 2147

 Score =  182 bits (461), Expect = 3e-44
 Identities = 96/116 (82%), Positives = 98/116 (84%)
 Frame = -1

Query: 350 DTSVAVCTIEKANSLVNRLLEEGRLSEVGIIVIDELHMVGDQSRGYLLELMLTKLRYAAG 171
           DTSVAVCTIEKANSLVNRLLEEGRLSE+GIIVIDELHMVGD  RGYLLELMLTKLRYAAG
Sbjct: 580 DTSVAVCTIEKANSLVNRLLEEGRLSEMGIIVIDELHMVGDPRRGYLLELMLTKLRYAAG 639

Query: 170 EGNLXXXXXXXXXXXXGKADPAQGLQIVGMSATMPNVGAVADWLRAALYQTEFRPV 3
           EG               KADPAQGLQIVGMSATMPNV AVADWL+AALYQTEFRPV
Sbjct: 640 EGIPKSSDGESSGGSSDKADPAQGLQIVGMSATMPNVAAVADWLQAALYQTEFRPV 695


>ref|XP_004168093.1| PREDICTED: DNA polymerase theta-like, partial [Cucumis sativus]
          Length = 1607

 Score =  180 bits (456), Expect = 1e-43
 Identities = 92/116 (79%), Positives = 100/116 (86%)
 Frame = -1

Query: 350 DTSVAVCTIEKANSLVNRLLEEGRLSEVGIIVIDELHMVGDQSRGYLLELMLTKLRYAAG 171
           DTSVAVCTIEKANSL+NRLLEE RLSE+GIIVIDELHMVGDQ+RGYLLEL+LTKLRYAAG
Sbjct: 65  DTSVAVCTIEKANSLINRLLEECRLSEIGIIVIDELHMVGDQTRGYLLELLLTKLRYAAG 124

Query: 170 EGNLXXXXXXXXXXXXGKADPAQGLQIVGMSATMPNVGAVADWLRAALYQTEFRPV 3
           EGNL            GK+DPA G+QIVGMSATMPNV AVADWL+AALY T+FRPV
Sbjct: 125 EGNLDSSSGESSGTSSGKSDPAHGIQIVGMSATMPNVAAVADWLQAALYHTDFRPV 180