BLASTX nr result
ID: Coptis25_contig00043294
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00043294 (350 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001078482.1| DNA polymerase theta subunit [Arabidopsis th... 186 2e-45 ref|XP_002869254.1| predicted protein [Arabidopsis lyrata subsp.... 184 9e-45 ref|XP_002281624.2| PREDICTED: LOW QUALITY PROTEIN: DNA polymera... 183 1e-44 ref|XP_003545584.1| PREDICTED: DNA polymerase theta-like [Glycin... 182 3e-44 ref|XP_004168093.1| PREDICTED: DNA polymerase theta-like, partia... 180 1e-43 >ref|NP_001078482.1| DNA polymerase theta subunit [Arabidopsis thaliana] gi|62241195|dbj|BAD93700.1| helicase and polymerase containing protein TEBICHI [Arabidopsis thaliana] gi|332660705|gb|AEE86105.1| DNA polymerase theta subunit [Arabidopsis thaliana] Length = 2154 Score = 186 bits (472), Expect = 2e-45 Identities = 97/116 (83%), Positives = 101/116 (87%) Frame = -1 Query: 350 DTSVAVCTIEKANSLVNRLLEEGRLSEVGIIVIDELHMVGDQSRGYLLELMLTKLRYAAG 171 DTSVAVCTIEKANSL+NRLLEEGRLSE+GIIVIDELHMVGDQ RGYLLELMLTKLRYAAG Sbjct: 606 DTSVAVCTIEKANSLINRLLEEGRLSELGIIVIDELHMVGDQHRGYLLELMLTKLRYAAG 665 Query: 170 EGNLXXXXXXXXXXXXGKADPAQGLQIVGMSATMPNVGAVADWLRAALYQTEFRPV 3 EG+ GKADPA GLQIVGMSATMPNVGAVADWL+AALYQTEFRPV Sbjct: 666 EGSSESSSGESSGTSSGKADPAHGLQIVGMSATMPNVGAVADWLQAALYQTEFRPV 721 >ref|XP_002869254.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297315090|gb|EFH45513.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 2147 Score = 184 bits (466), Expect = 9e-45 Identities = 96/115 (83%), Positives = 100/115 (86%) Frame = -1 Query: 347 TSVAVCTIEKANSLVNRLLEEGRLSEVGIIVIDELHMVGDQSRGYLLELMLTKLRYAAGE 168 TSVAVCTIEKANSL+NRLLEEGRLSE+GIIVIDELHMVGDQ RGYLLELMLTKLRYAAGE Sbjct: 606 TSVAVCTIEKANSLINRLLEEGRLSELGIIVIDELHMVGDQHRGYLLELMLTKLRYAAGE 665 Query: 167 GNLXXXXXXXXXXXXGKADPAQGLQIVGMSATMPNVGAVADWLRAALYQTEFRPV 3 G+ GKADPA GLQIVGMSATMPNVGAVADWL+AALYQTEFRPV Sbjct: 666 GSSESSSGESSGNSSGKADPAHGLQIVGMSATMPNVGAVADWLQAALYQTEFRPV 720 >ref|XP_002281624.2| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase theta-like [Vitis vinifera] Length = 2181 Score = 183 bits (464), Expect = 1e-44 Identities = 93/116 (80%), Positives = 102/116 (87%) Frame = -1 Query: 350 DTSVAVCTIEKANSLVNRLLEEGRLSEVGIIVIDELHMVGDQSRGYLLELMLTKLRYAAG 171 DTSVAVCTIEKANSL+NRLLEEGRLSE+GIIVIDELHMVGDQ+RGYLLEL+LTKLRYAAG Sbjct: 615 DTSVAVCTIEKANSLINRLLEEGRLSEIGIIVIDELHMVGDQNRGYLLELLLTKLRYAAG 674 Query: 170 EGNLXXXXXXXXXXXXGKADPAQGLQIVGMSATMPNVGAVADWLRAALYQTEFRPV 3 EG++ GK+DPA GLQIVGMSATMPNV AVADWL+AALYQT+FRPV Sbjct: 675 EGHVESVSGESSNMSSGKSDPAHGLQIVGMSATMPNVAAVADWLQAALYQTDFRPV 730 >ref|XP_003545584.1| PREDICTED: DNA polymerase theta-like [Glycine max] Length = 2147 Score = 182 bits (461), Expect = 3e-44 Identities = 96/116 (82%), Positives = 98/116 (84%) Frame = -1 Query: 350 DTSVAVCTIEKANSLVNRLLEEGRLSEVGIIVIDELHMVGDQSRGYLLELMLTKLRYAAG 171 DTSVAVCTIEKANSLVNRLLEEGRLSE+GIIVIDELHMVGD RGYLLELMLTKLRYAAG Sbjct: 580 DTSVAVCTIEKANSLVNRLLEEGRLSEMGIIVIDELHMVGDPRRGYLLELMLTKLRYAAG 639 Query: 170 EGNLXXXXXXXXXXXXGKADPAQGLQIVGMSATMPNVGAVADWLRAALYQTEFRPV 3 EG KADPAQGLQIVGMSATMPNV AVADWL+AALYQTEFRPV Sbjct: 640 EGIPKSSDGESSGGSSDKADPAQGLQIVGMSATMPNVAAVADWLQAALYQTEFRPV 695 >ref|XP_004168093.1| PREDICTED: DNA polymerase theta-like, partial [Cucumis sativus] Length = 1607 Score = 180 bits (456), Expect = 1e-43 Identities = 92/116 (79%), Positives = 100/116 (86%) Frame = -1 Query: 350 DTSVAVCTIEKANSLVNRLLEEGRLSEVGIIVIDELHMVGDQSRGYLLELMLTKLRYAAG 171 DTSVAVCTIEKANSL+NRLLEE RLSE+GIIVIDELHMVGDQ+RGYLLEL+LTKLRYAAG Sbjct: 65 DTSVAVCTIEKANSLINRLLEECRLSEIGIIVIDELHMVGDQTRGYLLELLLTKLRYAAG 124 Query: 170 EGNLXXXXXXXXXXXXGKADPAQGLQIVGMSATMPNVGAVADWLRAALYQTEFRPV 3 EGNL GK+DPA G+QIVGMSATMPNV AVADWL+AALY T+FRPV Sbjct: 125 EGNLDSSSGESSGTSSGKSDPAHGIQIVGMSATMPNVAAVADWLQAALYHTDFRPV 180