BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043290
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78385.1| hypothetical protein VITISV_017238 [Vitis vinifera]   190   9e-47
ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containi...   189   2e-46
emb|CAN83751.1| hypothetical protein VITISV_040023 [Vitis vinifera]   187   1e-45
emb|CBI29005.3| unnamed protein product [Vitis vinifera]              174   7e-42
emb|CBI29077.3| unnamed protein product [Vitis vinifera]              161   6e-38

>emb|CAN78385.1| hypothetical protein VITISV_017238 [Vitis vinifera]
          Length = 643

 Score =  190 bits (483), Expect = 9e-47
 Identities = 90/130 (69%), Positives = 111/130 (85%)
 Frame = -3

Query: 390 SGYVKCGDVEGAHGIFYKMPRRDVVSWNAMLACYAQSGKSNEAMELFNEMQGLGVKPTEA 211
           SG+VKCG+VE A G+F +MP RDVVSWN+MLACYAQ GK NEA+ LF++M+ +GVKPTEA
Sbjct: 136 SGFVKCGNVEEAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEA 195

Query: 210 TVVSLSSACGHLGALDQGASLHAYISEHKIGLTTIVGTALVDMYARCGSISLATEVFYSI 31
           TVVSL SAC HLGALD+G  LH YI++++I + +IVGTALVDMYA+CG ISLAT+VF ++
Sbjct: 196 TVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAM 255

Query: 30  ELKDVLTWNT 1
           E KDVL WNT
Sbjct: 256 ESKDVLAWNT 265



 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
 Frame = -3

Query: 384 YVKCGDVEGAHGIFYKMPRRDVVSWNAMLACYAQSGKSNEAMELFNEMQGLGVKPTEATV 205
           Y KCG +  A  +F  M  +DV++WN ++A  A  G   EA +LF EM+   V+P + T 
Sbjct: 239 YAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQQLFKEMKEASVEPNDITF 298

Query: 204 VSLSSACGHLGALDQGAS-LHAYISEHKIGLTTIVGTALVDMYARCGSISLATEVFYSIE 28
           V++ SAC H G +D+G   L    S + I         ++D+ AR G +  A E+  ++ 
Sbjct: 299 VAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYDCVIDLLARAGLLEEAMELIGTMP 358

Query: 27  LK 22
           ++
Sbjct: 359 ME 360


>ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
          Length = 762

 Score =  189 bits (481), Expect = 2e-46
 Identities = 89/130 (68%), Positives = 111/130 (85%)
 Frame = -3

Query: 390 SGYVKCGDVEGAHGIFYKMPRRDVVSWNAMLACYAQSGKSNEAMELFNEMQGLGVKPTEA 211
           +G+VKCG+VE A G+F +MP RDVVSWN+MLACYAQ GK NEA+ LF++M+ +GVKPTEA
Sbjct: 331 AGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEA 390

Query: 210 TVVSLSSACGHLGALDQGASLHAYISEHKIGLTTIVGTALVDMYARCGSISLATEVFYSI 31
           TVVSL SAC HLGALD+G  LH YI++++I + +IVGTALVDMYA+CG ISLAT+VF ++
Sbjct: 391 TVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAM 450

Query: 30  ELKDVLTWNT 1
           E KDVL WNT
Sbjct: 451 ESKDVLAWNT 460



 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 41/122 (33%), Positives = 66/122 (54%), Gaps = 1/122 (0%)
 Frame = -3

Query: 384 YVKCGDVEGAHGIFYKMPRRDVVSWNAMLACYAQSGKSNEAMELFNEMQGLGVKPTEATV 205
           Y KCG +  A  +F  M  +DV++WN ++A  A  G   EA +LF EM+  GV+P + T 
Sbjct: 434 YAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITF 493

Query: 204 VSLSSACGHLGALDQGAS-LHAYISEHKIGLTTIVGTALVDMYARCGSISLATEVFYSIE 28
           V++ SAC H G +D+G   L    S + I         ++D+ AR G +  A E+  ++ 
Sbjct: 494 VAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMP 553

Query: 27  LK 22
           ++
Sbjct: 554 ME 555


>emb|CAN83751.1| hypothetical protein VITISV_040023 [Vitis vinifera]
          Length = 496

 Score =  187 bits (474), Expect = 1e-45
 Identities = 88/129 (68%), Positives = 109/129 (84%)
 Frame = -3

Query: 387 GYVKCGDVEGAHGIFYKMPRRDVVSWNAMLACYAQSGKSNEAMELFNEMQGLGVKPTEAT 208
           G+VKCG+VE A G+F +MP RDVVSWN+MLACYAQ GK NEA+ LF++M  +GVKP+EAT
Sbjct: 136 GFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMXAVGVKPSEAT 195

Query: 207 VVSLSSACGHLGALDQGASLHAYISEHKIGLTTIVGTALVDMYARCGSISLATEVFYSIE 28
           VVSL SAC HLGALD+G  LH YI++++I + +IVGTALVDMYA+CG ISLAT+VF ++E
Sbjct: 196 VVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAME 255

Query: 27  LKDVLTWNT 1
            KDVL WNT
Sbjct: 256 SKDVLAWNT 264



 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 41/122 (33%), Positives = 66/122 (54%), Gaps = 1/122 (0%)
 Frame = -3

Query: 384 YVKCGDVEGAHGIFYKMPRRDVVSWNAMLACYAQSGKSNEAMELFNEMQGLGVKPTEATV 205
           Y KCG +  A  +F  M  +DV++WN ++A  A  G   EA +LF EM+  GV+P + T 
Sbjct: 238 YAKCGKISLATQVFNAMESKDVLAWNTIIAGMAILGHVKEAQQLFKEMKEAGVEPNDITF 297

Query: 204 VSLSSACGHLGALDQGAS-LHAYISEHKIGLTTIVGTALVDMYARCGSISLATEVFYSIE 28
           V++ SAC H G +D+G   L    S + I         ++D+ AR G +  A E+  ++ 
Sbjct: 298 VAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGLLEEAMELIGTMP 357

Query: 27  LK 22
           ++
Sbjct: 358 ME 359


>emb|CBI29005.3| unnamed protein product [Vitis vinifera]
          Length = 587

 Score =  174 bits (441), Expect = 7e-42
 Identities = 83/124 (66%), Positives = 103/124 (83%)
 Frame = -3

Query: 372 GDVEGAHGIFYKMPRRDVVSWNAMLACYAQSGKSNEAMELFNEMQGLGVKPTEATVVSLS 193
           G  + A G+F +MP RDVVSWN+MLACYAQ GK NEA+ LF++M+ +GVKPTEATVVSL 
Sbjct: 162 GKRDDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLL 221

Query: 192 SACGHLGALDQGASLHAYISEHKIGLTTIVGTALVDMYARCGSISLATEVFYSIELKDVL 13
           SAC HLGALD+G  LH YI++++I + +IVGTALVDMYA+CG ISLAT+VF ++E KDVL
Sbjct: 222 SACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVL 281

Query: 12  TWNT 1
            WNT
Sbjct: 282 AWNT 285



 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 41/122 (33%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
 Frame = -3

Query: 384 YVKCGDVEGAHGIFYKMPRRDVVSWNAMLACYAQSGKSNEAMELFNEMQGLGVKPTEATV 205
           Y KCG +  A  +F  M  +DV++WN ++A  A  G   EA  LF EM+  GV+P + T 
Sbjct: 259 YAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQRLFKEMKEAGVEPNDITF 318

Query: 204 VSLSSACGHLGALDQGAS-LHAYISEHKIGLTTIVGTALVDMYARCGSISLATEVFYSIE 28
           V++ SAC H G +D+G   L    S + I         ++D+ AR G +  A E+  ++ 
Sbjct: 319 VAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGLLEEAMELIGTMP 378

Query: 27  LK 22
           ++
Sbjct: 379 ME 380


>emb|CBI29077.3| unnamed protein product [Vitis vinifera]
          Length = 671

 Score =  161 bits (407), Expect = 6e-38
 Identities = 79/129 (61%), Positives = 101/129 (78%)
 Frame = -3

Query: 387 GYVKCGDVEGAHGIFYKMPRRDVVSWNAMLACYAQSGKSNEAMELFNEMQGLGVKPTEAT 208
           GYVK  ++  A  +F +M  RDV+SWN M+  YA  GK NEA+ LF++M+ +GVKPTEAT
Sbjct: 241 GYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAICGKPNEALALFDQMRAVGVKPTEAT 300

Query: 207 VVSLSSACGHLGALDQGASLHAYISEHKIGLTTIVGTALVDMYARCGSISLATEVFYSIE 28
           VVSL SAC HLGALD+G  LH YI++++I + +IVGTALVDMYA+CG ISLAT+VF ++E
Sbjct: 301 VVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAME 360

Query: 27  LKDVLTWNT 1
            KDVL WNT
Sbjct: 361 SKDVLAWNT 369



 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 41/122 (33%), Positives = 66/122 (54%), Gaps = 1/122 (0%)
 Frame = -3

Query: 384 YVKCGDVEGAHGIFYKMPRRDVVSWNAMLACYAQSGKSNEAMELFNEMQGLGVKPTEATV 205
           Y KCG +  A  +F  M  +DV++WN ++A  A  G   EA +LF EM+  GV+P + T 
Sbjct: 343 YAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITF 402

Query: 204 VSLSSACGHLGALDQGAS-LHAYISEHKIGLTTIVGTALVDMYARCGSISLATEVFYSIE 28
           V++ SAC H G +D+G   L    S + I         ++D+ AR G +  A E+  ++ 
Sbjct: 403 VAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMP 462

Query: 27  LK 22
           ++
Sbjct: 463 ME 464