BLASTX nr result

ID: Coptis25_contig00043284 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043284
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66422.1| hypothetical protein VITISV_007982 [Vitis vinifera]   120   1e-25
ref|XP_002278672.1| PREDICTED: LRR receptor-like serine/threonin...   119   2e-25
ref|XP_002318086.1| predicted protein [Populus trichocarpa] gi|2...   115   4e-24
ref|XP_003525510.1| PREDICTED: LRR receptor-like serine/threonin...   107   1e-21
ref|XP_002511369.1| serine-threonine protein kinase, plant-type,...   107   1e-21

>emb|CAN66422.1| hypothetical protein VITISV_007982 [Vitis vinifera]
          Length = 913

 Score =  120 bits (301), Expect = 1e-25
 Identities = 59/91 (64%), Positives = 67/91 (73%)
 Frame = +1

Query: 1    STISQFPLSSFLGNKDLCGQPLVSCSRLTSSSKKPLSETAVAGIVVAIVFTSTLICCIML 180
            ST S+FPLSSF+ N  LCG PL SCS      K+ LS TAVAGI+VAIVFTSTLIC ++L
Sbjct: 772  STFSEFPLSSFMXNDKLCGPPLESCSEYAGQEKRRLSNTAVAGIIVAIVFTSTLICLVLL 831

Query: 181  YIMLRIWSTWQKVSISSSDSDGTEQNTIHEK 273
            YIM+RIW TW+KV I SSD  GTE N   EK
Sbjct: 832  YIMVRIWCTWRKVMILSSDGGGTEXNIEEEK 862


>ref|XP_002278672.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1
            [Vitis vinifera]
          Length = 974

 Score =  119 bits (299), Expect = 2e-25
 Identities = 59/91 (64%), Positives = 67/91 (73%)
 Frame = +1

Query: 1    STISQFPLSSFLGNKDLCGQPLVSCSRLTSSSKKPLSETAVAGIVVAIVFTSTLICCIML 180
            ST S+FPLSSF+ N  LCG PL SCS      K+ LS TAVAGI+VAIVFTSTLIC ++L
Sbjct: 833  STFSEFPLSSFMLNDKLCGPPLESCSEYAGQEKRRLSNTAVAGIIVAIVFTSTLICLVLL 892

Query: 181  YIMLRIWSTWQKVSISSSDSDGTEQNTIHEK 273
            YIM+RIW TW+KV I SSD  GTE N   EK
Sbjct: 893  YIMVRIWCTWRKVMILSSDGGGTEHNIEEEK 923


>ref|XP_002318086.1| predicted protein [Populus trichocarpa] gi|222858759|gb|EEE96306.1|
            predicted protein [Populus trichocarpa]
          Length = 975

 Score =  115 bits (288), Expect = 4e-24
 Identities = 56/91 (61%), Positives = 67/91 (73%)
 Frame = +1

Query: 1    STISQFPLSSFLGNKDLCGQPLVSCSRLTSSSKKPLSETAVAGIVVAIVFTSTLICCIML 180
            ST S FPLSSFLGN  LCG PLVSC       K+ LS TAV GI+VAIVFTS+LIC +ML
Sbjct: 835  STFSGFPLSSFLGNDKLCGPPLVSCLESAGQEKRGLSNTAVVGIIVAIVFTSSLICLVML 894

Query: 181  YIMLRIWSTWQKVSISSSDSDGTEQNTIHEK 273
            Y+++RIW  W++V+ISS D+ GTEQ    EK
Sbjct: 895  YMIVRIWCNWRQVTISSMDAGGTEQRREEEK 925


>ref|XP_003525510.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase
            GSO1-like [Glycine max]
          Length = 962

 Score =  107 bits (267), Expect = 1e-21
 Identities = 53/83 (63%), Positives = 61/83 (73%)
 Frame = +1

Query: 1    STISQFPLSSFLGNKDLCGQPLVSCSRLTSSSKKPLSETAVAGIVVAIVFTSTLICCIML 180
            S  S FPLSSFL N  LCG PL SCS  T+  K  LS T VA I+VAIVFTST+IC +ML
Sbjct: 833  SIFSGFPLSSFLNNNGLCGPPLSSCSESTAQGKMQLSNTQVAVIIVAIVFTSTVICLVML 892

Query: 181  YIMLRIWSTWQKVSISSSDSDGT 249
            YIMLRIW  W+KV+ISS++  GT
Sbjct: 893  YIMLRIWCNWRKVAISSAEGGGT 915


>ref|XP_002511369.1| serine-threonine protein kinase, plant-type, putative [Ricinus
            communis] gi|223550484|gb|EEF51971.1| serine-threonine
            protein kinase, plant-type, putative [Ricinus communis]
          Length = 976

 Score =  107 bits (266), Expect = 1e-21
 Identities = 55/93 (59%), Positives = 66/93 (70%), Gaps = 1/93 (1%)
 Frame = +1

Query: 1    STISQFPLSSFLGNKDLCGQPLVSCSRLTSSSKKPLSETAVAGIVVAIVFTSTLICCIML 180
            ST S FPLSSF+GN  LCG PL SCS      +K LS TAV GI+VAIVFTSTLIC +ML
Sbjct: 836  STFSGFPLSSFVGNGKLCGPPLESCSESRGQERKSLSSTAVVGIIVAIVFTSTLICLVML 895

Query: 181  YIMLRIWSTW-QKVSISSSDSDGTEQNTIHEKK 276
            Y+M+RIW  W ++VSISS D+ G  +    E+K
Sbjct: 896  YMMVRIWCNWRRRVSISSLDNGGGIEQRREEEK 928


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