BLASTX nr result

ID: Coptis25_contig00043276 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043276
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79781.1| hypothetical protein VITISV_041886 [Vitis vinifera]    69   3e-10
emb|CAN71427.1| hypothetical protein VITISV_027864 [Vitis vinifera]    64   2e-08
emb|CAN73532.1| hypothetical protein VITISV_012827 [Vitis vinifera]    62   4e-08

>emb|CAN79781.1| hypothetical protein VITISV_041886 [Vitis vinifera]
          Length = 530

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 28/53 (52%), Positives = 35/53 (66%)
 Frame = -3

Query: 254 KTPIRLFCTRYNEQKKGWRCVDPTTNTAYVSPRVIFDDVSSWWSTENVVLPDS 96
           K  +R     Y+ Q+KGWRC DPTT   Y S  V+FD+ SSWWS+E  +LPDS
Sbjct: 385 KKAVRCVLVGYDSQRKGWRCCDPTTGKCYTSRNVVFDESSSWWSSEKEILPDS 437


>emb|CAN71427.1| hypothetical protein VITISV_027864 [Vitis vinifera]
          Length = 1300

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 26/53 (49%), Positives = 33/53 (62%)
 Frame = -3

Query: 254 KTPIRLFCTRYNEQKKGWRCVDPTTNTAYVSPRVIFDDVSSWWSTENVVLPDS 96
           K  +R     Y+ Q+K WRC DPTT   Y S  V+FD+ SSWWS+E  +L DS
Sbjct: 663 KKAVRCVLVGYDSQRKXWRCCDPTTGKCYTSRNVVFDESSSWWSSEKEILXDS 715


>emb|CAN73532.1| hypothetical protein VITISV_012827 [Vitis vinifera]
          Length = 1194

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 26/53 (49%), Positives = 33/53 (62%)
 Frame = -3

Query: 254 KTPIRLFCTRYNEQKKGWRCVDPTTNTAYVSPRVIFDDVSSWWSTENVVLPDS 96
           K  +R     Y+ Q K WRC +PTT   Y S  V+FD+ SSWWS+E  +LPDS
Sbjct: 660 KKXVRCVLVGYDSQXKRWRCCNPTTGKYYTSRNVVFDESSSWWSSEKEILPDS 712


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