BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043259
         (493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containi...   171   7e-41
emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera]   171   7e-41
ref|XP_002528032.1| pentatricopeptide repeat-containing protein,...   156   2e-36
ref|XP_002325515.1| predicted protein [Populus trichocarpa] gi|2...   154   7e-36
emb|CBI31329.3| unnamed protein product [Vitis vinifera]              146   2e-33

>ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Vitis vinifera]
          Length = 748

 Score =  171 bits (432), Expect = 7e-41
 Identities = 83/132 (62%), Positives = 97/132 (73%)
 Frame = +3

Query: 96  GKHLHAHAIILGFEQHPLLVPKLVTFYSSFGYLTDAHFITLSNSRDGTSLKWNVLISGYV 275
           G+ LH H I LGFEQHP+LVPKLVTFYS+F  L DAH IT  NS       WN+LIS YV
Sbjct: 119 GRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVIT-ENSNILHPFPWNLLISSYV 177

Query: 276 KCGFYREAILVYKQMVGLGVKPDKFTYPSVFKACGYELDLGFGKEVHKCIEGSYIEWDLF 455
           + GF ++A+  YKQMV  G++PD FTYPSV KACG ELDLGFGKEVH+ I  S I+W L 
Sbjct: 178 RNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLGFGKEVHESINASRIKWSLI 237

Query: 456 VQNALVTMYVKC 491
           V NAL++MY KC
Sbjct: 238 VHNALISMYGKC 249


>emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera]
          Length = 822

 Score =  171 bits (432), Expect = 7e-41
 Identities = 83/132 (62%), Positives = 97/132 (73%)
 Frame = +3

Query: 96  GKHLHAHAIILGFEQHPLLVPKLVTFYSSFGYLTDAHFITLSNSRDGTSLKWNVLISGYV 275
           G+ LH H I LGFEQHP+LVPKLVTFYS+F  L DAH IT  NS       WN+LIS YV
Sbjct: 193 GRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVIT-ENSNILHPFPWNLLISSYV 251

Query: 276 KCGFYREAILVYKQMVGLGVKPDKFTYPSVFKACGYELDLGFGKEVHKCIEGSYIEWDLF 455
           + GF ++A+  YKQMV  G++PD FTYPSV KACG ELDLGFGKEVH+ I  S I+W L 
Sbjct: 252 RNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLGFGKEVHESINASRIKWSLI 311

Query: 456 VQNALVTMYVKC 491
           V NAL++MY KC
Sbjct: 312 VHNALISMYGKC 323


>ref|XP_002528032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532562|gb|EEF34350.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 730

 Score =  156 bits (394), Expect = 2e-36
 Identities = 76/131 (58%), Positives = 94/131 (71%)
 Frame = +3

Query: 96  GKHLHAHAIILGFEQHPLLVPKLVTFYSSFGYLTDAHFITLSNSRDGTSLKWNVLISGYV 275
           GK LH   I LGFEQHP++VPKLVTFY++F  L DAH IT  NS     L WN+LIS YV
Sbjct: 112 GKQLHTLIISLGFEQHPIIVPKLVTFYTNFDLLADAHTIT-ENSNILHPLPWNLLISSYV 170

Query: 276 KCGFYREAILVYKQMVGLGVKPDKFTYPSVFKACGYELDLGFGKEVHKCIEGSYIEWDLF 455
           + G + EA+  YKQM   G++PDKFTYPSV KACG +LD+ FGK++H  I  S + W+LF
Sbjct: 171 RNGLHGEALSAYKQMTHKGIRPDKFTYPSVLKACGEKLDIAFGKKLHASINASCLGWNLF 230

Query: 456 VQNALVTMYVK 488
           V N+LV+MY K
Sbjct: 231 VHNSLVSMYAK 241



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 37/133 (27%), Positives = 66/133 (49%), Gaps = 2/133 (1%)
 Frame = +3

Query: 96  GKHLHAHAIILGFEQHPLLVPKLVTFYSSFGYLTDAHFITLSNSRDGTSLKWNVLISGYV 275
           G+ +H  AI   ++    +   L+T YS   YL  A+ +   ++R    + WN ++SGY 
Sbjct: 349 GREIHGSAIRSFYDGVDNVKNALITMYSRCKYLRHAYNL-FQSTRTKNIITWNSMLSGYT 407

Query: 276 KCGFYREAILVYKQMVGLGVKPDKFTYPSVFKACGYELDLGFGKEVHKCI--EGSYIEWD 449
                 EA  ++++M+  G++P+  T  S+   C    +L  GKE H  I     + ++ 
Sbjct: 408 HMDRSEEASFLFREMLLSGIEPNYVTIASILPLCARVANLQHGKEFHCYILRRAGFKDY- 466

Query: 450 LFVQNALVTMYVK 488
           L + N+LV MY +
Sbjct: 467 LLLWNSLVDMYAR 479


>ref|XP_002325515.1| predicted protein [Populus trichocarpa] gi|222862390|gb|EEE99896.1|
           predicted protein [Populus trichocarpa]
          Length = 683

 Score =  154 bits (389), Expect = 7e-36
 Identities = 79/132 (59%), Positives = 95/132 (71%), Gaps = 1/132 (0%)
 Frame = +3

Query: 96  GKHLHAHAIILGFEQHPLLVPKLVTFYSSFGYLTDAHFITLSNSRDGTSLKWNVLISGYV 275
           GK LHAH I LGFE H +LVPKLVTFYSSF  L DAH IT+ NS     L WN+LIS YV
Sbjct: 60  GKQLHAHTISLGFENHLVLVPKLVTFYSSFSLLADAHTITV-NSDIVNPLPWNLLISSYV 118

Query: 276 KCGFYREAILVYKQMVGLGVKPDKFTYPSVFKACGYELDLGFGKEVHKCIEGSY-IEWDL 452
             G + EA+  Y++MV  GV+PD FTYPSV KACG +LDL FG+EVH+ I  +Y   W+L
Sbjct: 119 NNGLHGEALSAYREMVHKGVRPDNFTYPSVLKACGEKLDLDFGREVHESINAAYGHRWNL 178

Query: 453 FVQNALVTMYVK 488
           +V N+LV+MY K
Sbjct: 179 YVHNSLVSMYGK 190


>emb|CBI31329.3| unnamed protein product [Vitis vinifera]
          Length = 753

 Score =  146 bits (369), Expect = 2e-33
 Identities = 72/113 (63%), Positives = 83/113 (73%)
 Frame = +3

Query: 96  GKHLHAHAIILGFEQHPLLVPKLVTFYSSFGYLTDAHFITLSNSRDGTSLKWNVLISGYV 275
           G+ LH H I LGFEQHP+LVPKLVTFYS+F  L DAH IT  NS       WN+LIS YV
Sbjct: 119 GRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVIT-ENSNILHPFPWNLLISSYV 177

Query: 276 KCGFYREAILVYKQMVGLGVKPDKFTYPSVFKACGYELDLGFGKEVHKCIEGS 434
           + GF ++A+  YKQMV  G++PD FTYPSV KACG ELDLGFGKEVH+ I  S
Sbjct: 178 RNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLGFGKEVHESINAS 230