BLASTX nr result

ID: Coptis25_contig00043229 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043229
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17926.3| unnamed protein product [Vitis vinifera]              148   5e-34
emb|CAN60259.1| hypothetical protein VITISV_007741 [Vitis vinifera]   144   7e-33
gb|EEE58673.1| hypothetical protein OsJ_10095 [Oryza sativa Japo...   130   8e-29
gb|EEC74844.1| hypothetical protein OsI_10704 [Oryza sativa Indi...   130   8e-29
ref|NP_001049519.2| Os03g0241800 [Oryza sativa Japonica Group] g...   130   8e-29

>emb|CBI17926.3| unnamed protein product [Vitis vinifera]
          Length = 602

 Score =  148 bits (373), Expect = 5e-34
 Identities = 70/102 (68%), Positives = 83/102 (81%), Gaps = 1/102 (0%)
 Frame = +1

Query: 1   GHGKQVIDQFMKMQEAGVQPDDVTFVGVLNACAHAGLLDQGKMYFESMG-IYNLRHKIEH 177
           G G++ +  F KM+EA VQPDDVT VGVL+ACAHAGLLDQG  YF+SM  ++ L  K+EH
Sbjct: 404 GRGEKALHYFSKMKEAQVQPDDVTMVGVLSACAHAGLLDQGWWYFQSMEKVFGLVPKVEH 463

Query: 178 YGCMIDLLCRMGCLREAYDLIMDMPMEPNVVVWGALLSACRV 303
           YGCM+DLL RMGCL+EAYDLIM MPME N ++WGA LSACRV
Sbjct: 464 YGCMVDLLGRMGCLKEAYDLIMGMPMEANEIIWGAFLSACRV 505


>emb|CAN60259.1| hypothetical protein VITISV_007741 [Vitis vinifera]
          Length = 602

 Score =  144 bits (363), Expect = 7e-33
 Identities = 69/102 (67%), Positives = 82/102 (80%), Gaps = 1/102 (0%)
 Frame = +1

Query: 1   GHGKQVIDQFMKMQEAGVQPDDVTFVGVLNACAHAGLLDQGKMYFESMG-IYNLRHKIEH 177
           G G++ +  F KM+EA VQPDDVT VGVL+ACAHAGLLDQG  YF+SM  ++ L  K+EH
Sbjct: 404 GRGEKALHYFSKMKEAQVQPDDVTMVGVLSACAHAGLLDQGWWYFQSMEKVFGLVPKVEH 463

Query: 178 YGCMIDLLCRMGCLREAYDLIMDMPMEPNVVVWGALLSACRV 303
           YG M+DLL RMGCL+EAYDLIM MPME N ++WGA LSACRV
Sbjct: 464 YGXMVDLLGRMGCLKEAYDLIMGMPMEANEIIWGAFLSACRV 505


>gb|EEE58673.1| hypothetical protein OsJ_10095 [Oryza sativa Japonica Group]
          Length = 669

 Score =  130 bits (328), Expect = 8e-29
 Identities = 60/102 (58%), Positives = 76/102 (74%), Gaps = 1/102 (0%)
 Frame = +1

Query: 1   GHGKQVIDQFMKMQEAGVQPDDVTFVGVLNACAHAGLLDQGKMYFESM-GIYNLRHKIEH 177
           GHG++ ID F KM   G++PD + FV +L AC+HAGLLD GK YF SM   +++  K+EH
Sbjct: 262 GHGREAIDLFEKMCGQGLEPDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPKLEH 321

Query: 178 YGCMIDLLCRMGCLREAYDLIMDMPMEPNVVVWGALLSACRV 303
           Y CM+DLL R GC+REAYD IM MP++PN  VWGALL ACR+
Sbjct: 322 YACMVDLLGRAGCIREAYDFIMVMPIKPNERVWGALLGACRI 363


>gb|EEC74844.1| hypothetical protein OsI_10704 [Oryza sativa Indica Group]
          Length = 614

 Score =  130 bits (328), Expect = 8e-29
 Identities = 60/102 (58%), Positives = 76/102 (74%), Gaps = 1/102 (0%)
 Frame = +1

Query: 1   GHGKQVIDQFMKMQEAGVQPDDVTFVGVLNACAHAGLLDQGKMYFESM-GIYNLRHKIEH 177
           GHG++ ID F KM   G++PD + FV +L AC+HAGLLD GK YF SM   +++  K+EH
Sbjct: 207 GHGREAIDLFEKMCGQGLEPDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPKLEH 266

Query: 178 YGCMIDLLCRMGCLREAYDLIMDMPMEPNVVVWGALLSACRV 303
           Y CM+DLL R GC+REAYD IM MP++PN  VWGALL ACR+
Sbjct: 267 YACMVDLLGRAGCIREAYDFIMVMPIKPNERVWGALLGACRI 308


>ref|NP_001049519.2| Os03g0241800 [Oryza sativa Japonica Group]
           gi|108707104|gb|ABF94899.1| pentatricopeptide, putative,
           expressed [Oryza sativa Japonica Group]
           gi|255674356|dbj|BAF11433.2| Os03g0241800 [Oryza sativa
           Japonica Group]
          Length = 810

 Score =  130 bits (328), Expect = 8e-29
 Identities = 60/102 (58%), Positives = 76/102 (74%), Gaps = 1/102 (0%)
 Frame = +1

Query: 1   GHGKQVIDQFMKMQEAGVQPDDVTFVGVLNACAHAGLLDQGKMYFESM-GIYNLRHKIEH 177
           GHG++ ID F KM   G++PD + FV +L AC+HAGLLD GK YF SM   +++  K+EH
Sbjct: 372 GHGREAIDLFEKMCGQGLEPDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPKLEH 431

Query: 178 YGCMIDLLCRMGCLREAYDLIMDMPMEPNVVVWGALLSACRV 303
           Y CM+DLL R GC+REAYD IM MP++PN  VWGALL ACR+
Sbjct: 432 YACMVDLLGRAGCIREAYDFIMVMPIKPNERVWGALLGACRI 473


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