BLASTX nr result
ID: Coptis25_contig00043212
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00043212 (388 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABD33115.1| SAM (and some other nucleotide) binding motif; Me... 192 2e-47 ref|XP_003605160.1| Pentatricopeptide repeat-containing protein ... 192 2e-47 ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containi... 191 5e-47 emb|CBI16398.3| unnamed protein product [Vitis vinifera] 191 5e-47 emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera] 191 5e-47 >gb|ABD33115.1| SAM (and some other nucleotide) binding motif; Methyltransferase small; Tetratricopeptide-like helical [Medicago truncatula] Length = 971 Score = 192 bits (489), Expect = 2e-47 Identities = 87/129 (67%), Positives = 111/129 (86%) Frame = -1 Query: 388 LTWTSVINGLALHGHAKDSISFFLEMISIGFVPDEVTFIGVLSACCHAGFVDEGRQFFAQ 209 LTWT+VI GLALHG+A+D++S+F +MI IG VPDE+TF+GVLSACCH G V+EGR++F++ Sbjct: 458 LTWTAVICGLALHGNAQDALSYFSKMIHIGIVPDEITFLGVLSACCHGGLVEEGRKYFSE 517 Query: 208 MSTEYNISPKMKHYSCMVDLLGRADLLSEAEQLIKTMPMEPDTVILGALFFACKNHGNVA 29 MS+++N+SPK+KHYSCMVDLLGRA L EAE+L+K MPM D +LGALFFAC+ +GNV Sbjct: 518 MSSKFNVSPKLKHYSCMVDLLGRAGHLEEAEELVKNMPMAADAAVLGALFFACRVYGNVQ 577 Query: 28 IGERVAAKL 2 IGER A KL Sbjct: 578 IGERTAFKL 586 >ref|XP_003605160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] gi|355506215|gb|AES87357.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] Length = 1026 Score = 192 bits (489), Expect = 2e-47 Identities = 87/129 (67%), Positives = 111/129 (86%) Frame = -1 Query: 388 LTWTSVINGLALHGHAKDSISFFLEMISIGFVPDEVTFIGVLSACCHAGFVDEGRQFFAQ 209 LTWT+VI GLALHG+A+D++S+F +MI IG VPDE+TF+GVLSACCH G V+EGR++F++ Sbjct: 458 LTWTAVICGLALHGNAQDALSYFSKMIHIGIVPDEITFLGVLSACCHGGLVEEGRKYFSE 517 Query: 208 MSTEYNISPKMKHYSCMVDLLGRADLLSEAEQLIKTMPMEPDTVILGALFFACKNHGNVA 29 MS+++N+SPK+KHYSCMVDLLGRA L EAE+L+K MPM D +LGALFFAC+ +GNV Sbjct: 518 MSSKFNVSPKLKHYSCMVDLLGRAGHLEEAEELVKNMPMAADAAVLGALFFACRVYGNVQ 577 Query: 28 IGERVAAKL 2 IGER A KL Sbjct: 578 IGERTAFKL 586 >ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like [Vitis vinifera] Length = 642 Score = 191 bits (485), Expect = 5e-47 Identities = 86/129 (66%), Positives = 112/129 (86%) Frame = -1 Query: 388 LTWTSVINGLALHGHAKDSISFFLEMISIGFVPDEVTFIGVLSACCHAGFVDEGRQFFAQ 209 LTWT++I+GLALHG+A +I++F EMI +PDEVTF+G+LSACCH G V+EGR++F+Q Sbjct: 407 LTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQ 466 Query: 208 MSTEYNISPKMKHYSCMVDLLGRADLLSEAEQLIKTMPMEPDTVILGALFFACKNHGNVA 29 MS+++N+SPK+KHYSCMVDLLGRA LL EAE+LIK+MP+E D V+ GALFFAC+ HGNV Sbjct: 467 MSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHGNVL 526 Query: 28 IGERVAAKL 2 +GER A+KL Sbjct: 527 MGERAASKL 535 >emb|CBI16398.3| unnamed protein product [Vitis vinifera] Length = 608 Score = 191 bits (485), Expect = 5e-47 Identities = 86/129 (66%), Positives = 112/129 (86%) Frame = -1 Query: 388 LTWTSVINGLALHGHAKDSISFFLEMISIGFVPDEVTFIGVLSACCHAGFVDEGRQFFAQ 209 LTWT++I+GLALHG+A +I++F EMI +PDEVTF+G+LSACCH G V+EGR++F+Q Sbjct: 379 LTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQ 438 Query: 208 MSTEYNISPKMKHYSCMVDLLGRADLLSEAEQLIKTMPMEPDTVILGALFFACKNHGNVA 29 MS+++N+SPK+KHYSCMVDLLGRA LL EAE+LIK+MP+E D V+ GALFFAC+ HGNV Sbjct: 439 MSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHGNVL 498 Query: 28 IGERVAAKL 2 +GER A+KL Sbjct: 499 MGERAASKL 507 >emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera] Length = 599 Score = 191 bits (485), Expect = 5e-47 Identities = 86/129 (66%), Positives = 112/129 (86%) Frame = -1 Query: 388 LTWTSVINGLALHGHAKDSISFFLEMISIGFVPDEVTFIGVLSACCHAGFVDEGRQFFAQ 209 LTWT++I+GLALHG+A +I++F EMI +PDEVTF+G+LSACCH G V+EGR++F+Q Sbjct: 364 LTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQ 423 Query: 208 MSTEYNISPKMKHYSCMVDLLGRADLLSEAEQLIKTMPMEPDTVILGALFFACKNHGNVA 29 MS+++N+SPK+KHYSCMVDLLGRA LL EAE+LIK+MP+E D V+ GALFFAC+ HGNV Sbjct: 424 MSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHGNVL 483 Query: 28 IGERVAAKL 2 +GER A+KL Sbjct: 484 MGERAASKL 492