BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043212
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD33115.1| SAM (and some other nucleotide) binding motif; Me...   192   2e-47
ref|XP_003605160.1| Pentatricopeptide repeat-containing protein ...   192   2e-47
ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containi...   191   5e-47
emb|CBI16398.3| unnamed protein product [Vitis vinifera]              191   5e-47
emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera]   191   5e-47

>gb|ABD33115.1| SAM (and some other nucleotide) binding motif; Methyltransferase
           small; Tetratricopeptide-like helical [Medicago
           truncatula]
          Length = 971

 Score =  192 bits (489), Expect = 2e-47
 Identities = 87/129 (67%), Positives = 111/129 (86%)
 Frame = -1

Query: 388 LTWTSVINGLALHGHAKDSISFFLEMISIGFVPDEVTFIGVLSACCHAGFVDEGRQFFAQ 209
           LTWT+VI GLALHG+A+D++S+F +MI IG VPDE+TF+GVLSACCH G V+EGR++F++
Sbjct: 458 LTWTAVICGLALHGNAQDALSYFSKMIHIGIVPDEITFLGVLSACCHGGLVEEGRKYFSE 517

Query: 208 MSTEYNISPKMKHYSCMVDLLGRADLLSEAEQLIKTMPMEPDTVILGALFFACKNHGNVA 29
           MS+++N+SPK+KHYSCMVDLLGRA  L EAE+L+K MPM  D  +LGALFFAC+ +GNV 
Sbjct: 518 MSSKFNVSPKLKHYSCMVDLLGRAGHLEEAEELVKNMPMAADAAVLGALFFACRVYGNVQ 577

Query: 28  IGERVAAKL 2
           IGER A KL
Sbjct: 578 IGERTAFKL 586


>ref|XP_003605160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355506215|gb|AES87357.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 1026

 Score =  192 bits (489), Expect = 2e-47
 Identities = 87/129 (67%), Positives = 111/129 (86%)
 Frame = -1

Query: 388 LTWTSVINGLALHGHAKDSISFFLEMISIGFVPDEVTFIGVLSACCHAGFVDEGRQFFAQ 209
           LTWT+VI GLALHG+A+D++S+F +MI IG VPDE+TF+GVLSACCH G V+EGR++F++
Sbjct: 458 LTWTAVICGLALHGNAQDALSYFSKMIHIGIVPDEITFLGVLSACCHGGLVEEGRKYFSE 517

Query: 208 MSTEYNISPKMKHYSCMVDLLGRADLLSEAEQLIKTMPMEPDTVILGALFFACKNHGNVA 29
           MS+++N+SPK+KHYSCMVDLLGRA  L EAE+L+K MPM  D  +LGALFFAC+ +GNV 
Sbjct: 518 MSSKFNVSPKLKHYSCMVDLLGRAGHLEEAEELVKNMPMAADAAVLGALFFACRVYGNVQ 577

Query: 28  IGERVAAKL 2
           IGER A KL
Sbjct: 578 IGERTAFKL 586


>ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
           mitochondrial-like [Vitis vinifera]
          Length = 642

 Score =  191 bits (485), Expect = 5e-47
 Identities = 86/129 (66%), Positives = 112/129 (86%)
 Frame = -1

Query: 388 LTWTSVINGLALHGHAKDSISFFLEMISIGFVPDEVTFIGVLSACCHAGFVDEGRQFFAQ 209
           LTWT++I+GLALHG+A  +I++F EMI    +PDEVTF+G+LSACCH G V+EGR++F+Q
Sbjct: 407 LTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQ 466

Query: 208 MSTEYNISPKMKHYSCMVDLLGRADLLSEAEQLIKTMPMEPDTVILGALFFACKNHGNVA 29
           MS+++N+SPK+KHYSCMVDLLGRA LL EAE+LIK+MP+E D V+ GALFFAC+ HGNV 
Sbjct: 467 MSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHGNVL 526

Query: 28  IGERVAAKL 2
           +GER A+KL
Sbjct: 527 MGERAASKL 535


>emb|CBI16398.3| unnamed protein product [Vitis vinifera]
          Length = 608

 Score =  191 bits (485), Expect = 5e-47
 Identities = 86/129 (66%), Positives = 112/129 (86%)
 Frame = -1

Query: 388 LTWTSVINGLALHGHAKDSISFFLEMISIGFVPDEVTFIGVLSACCHAGFVDEGRQFFAQ 209
           LTWT++I+GLALHG+A  +I++F EMI    +PDEVTF+G+LSACCH G V+EGR++F+Q
Sbjct: 379 LTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQ 438

Query: 208 MSTEYNISPKMKHYSCMVDLLGRADLLSEAEQLIKTMPMEPDTVILGALFFACKNHGNVA 29
           MS+++N+SPK+KHYSCMVDLLGRA LL EAE+LIK+MP+E D V+ GALFFAC+ HGNV 
Sbjct: 439 MSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHGNVL 498

Query: 28  IGERVAAKL 2
           +GER A+KL
Sbjct: 499 MGERAASKL 507


>emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera]
          Length = 599

 Score =  191 bits (485), Expect = 5e-47
 Identities = 86/129 (66%), Positives = 112/129 (86%)
 Frame = -1

Query: 388 LTWTSVINGLALHGHAKDSISFFLEMISIGFVPDEVTFIGVLSACCHAGFVDEGRQFFAQ 209
           LTWT++I+GLALHG+A  +I++F EMI    +PDEVTF+G+LSACCH G V+EGR++F+Q
Sbjct: 364 LTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQ 423

Query: 208 MSTEYNISPKMKHYSCMVDLLGRADLLSEAEQLIKTMPMEPDTVILGALFFACKNHGNVA 29
           MS+++N+SPK+KHYSCMVDLLGRA LL EAE+LIK+MP+E D V+ GALFFAC+ HGNV 
Sbjct: 424 MSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHGNVL 483

Query: 28  IGERVAAKL 2
           +GER A+KL
Sbjct: 484 MGERAASKL 492