BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043189
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK37781.1| unknown [Lotus japonicus]                               58   7e-07
ref|XP_003612646.1| F-box family protein [Medicago truncatula] g...    57   1e-06
ref|XP_003612650.1| F-box family protein [Medicago truncatula] g...    55   5e-06

>gb|AFK37781.1| unknown [Lotus japonicus]
          Length = 489

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 41/118 (34%), Positives = 56/118 (47%), Gaps = 15/118 (12%)
 Frame = +2

Query: 2   PITGDYVALPSDTCIFKDVGF------IAFGYDIVNNEYKVIRV------RHHNCGGEVC 145
           PITG+++ LP  + I K   F        FG+   NNEYKV+R+       H     EV 
Sbjct: 200 PITGEFIRLPQTSRIGKTNKFSIQEIYAGFGFQPKNNEYKVVRILRGLQFYHGIMAAEVH 259

Query: 146 TLGTTRWRRLEGVVPPFFK-QFGILVKGNLHWISDELD--KIVVFNVALEKFHEIQSP 310
           TLGT+ WR +E     F+  +F   V G LHWI        I+ F+   E+F    +P
Sbjct: 260 TLGTSTWRNVEVNSMYFYHLRFPTCVSGALHWIGSYHGTLSILCFDFESERFRSFPTP 317


>ref|XP_003612646.1| F-box family protein [Medicago truncatula]
           gi|355513981|gb|AES95604.1| F-box family protein
           [Medicago truncatula]
          Length = 441

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 51/135 (37%), Positives = 68/135 (50%), Gaps = 19/135 (14%)
 Frame = +2

Query: 2   PITGDYVALPSDTCIFKDVGFI--AFGYDIVNNEYKVIRVRHHNCGG----------EVC 145
           PI G+++ LP    I      I  A G+    NEYKVIR+    C G          E+ 
Sbjct: 165 PIIGEFIRLPEAIGIANTRKPICAALGFQPKTNEYKVIRM-WKRCDGWCYKSDVMVVEMH 223

Query: 146 TLGTTRWRRLEGVVPPF-FKQFG--ILVKGNLHWIS-DELDK---IVVFNVALEKFHEIQ 304
           TLGTT WR +E V P F F + G    V G LHWI+ D+ +K   I+ FN   EKF    
Sbjct: 224 TLGTTTWRNVE-VDPMFSFTRLGSPTCVNGALHWINYDDKNKTRSILCFNFESEKFQSFP 282

Query: 305 SPFHMPEPNIQKISL 349
           SP   P P+ +++S+
Sbjct: 283 SP---PHPHHKRLSI 294


>ref|XP_003612650.1| F-box family protein [Medicago truncatula]
           gi|355513985|gb|AES95608.1| F-box family protein
           [Medicago truncatula]
          Length = 441

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 50/135 (37%), Positives = 67/135 (49%), Gaps = 19/135 (14%)
 Frame = +2

Query: 2   PITGDYVALPSDTCIFKDVGFI--AFGYDIVNNEYKVIRVRHHNCGG----------EVC 145
           PI G+++ LP    I      I  A G+    NEYKVIR+    C G          E+ 
Sbjct: 165 PIIGEFIRLPEAIGIANTRKPICAALGFQPKTNEYKVIRM-WKRCDGWCYKSDVMVVEMH 223

Query: 146 TLGTTRWRRLEGVVPPF-FKQFG--ILVKGNLHWIS-DELDK---IVVFNVALEKFHEIQ 304
           TLGT  WR +E V P F F + G    V G LHWI+ D+ +K   I+ FN   EKF    
Sbjct: 224 TLGTATWRNVE-VDPMFSFTRLGSPTCVNGALHWINYDDKNKTRSILCFNFESEKFQSFP 282

Query: 305 SPFHMPEPNIQKISL 349
           SP   P P+ +++S+
Sbjct: 283 SP---PHPHHKRLSI 294