BLASTX nr result
ID: Coptis25_contig00043159
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00043159 (316 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_064081.1| orf288 gene product (mitochondrion) [Beta vulga... 119 3e-46 ref|YP_004222320.1| hypothetical protein BevumaM_p085 [Beta vulg... 119 3e-46 dbj|BAD66789.1| NADH dehydrogenase subunit 4 [Beta vulgaris subs... 119 4e-45 gb|EHK62688.1| hypothetical protein M3S_K18 (mitochondrion) [Sor... 119 7e-45 ref|YP_717159.1| NADH dehydrogenase subunit 4 [Brassica napus] g... 119 6e-44 >ref|NP_064081.1| orf288 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris] gi|323435102|ref|YP_004222319.1| hypothetical protein BevumaM_p084 [Beta vulgaris subsp. maritima] gi|346683193|ref|YP_004842125.1| hypothetical protein BemaM_p080 [Beta macrocarpa] gi|9087330|dbj|BAA99474.1| orf288 [Beta vulgaris subsp. vulgaris] gi|317905657|emb|CBJ14053.1| hypothetical protein [Beta vulgaris subsp. maritima] gi|319439835|emb|CBJ17544.1| hypothetical protein [Beta vulgaris subsp. maritima] gi|320148083|emb|CBJ20745.1| hypothetical protein [Beta vulgaris subsp. maritima] gi|345500111|emb|CBX24929.1| hypothetical protein [Beta macrocarpa] gi|384939143|emb|CBL51990.1| hypothetical protein (mitochondrion) [Beta vulgaris subsp. maritima] Length = 288 Score = 119 bits (298), Expect(2) = 3e-46 Identities = 60/60 (100%), Positives = 60/60 (100%) Frame = -1 Query: 316 VRYYGGLVSTMPNFSTIFFFFTLANMSLPGTSSFIGEFLILVGAFQRNSLVATLAALGMI 137 VRYYGGLVSTMPNFSTIFFFFTLANMSLPGTSSFIGEFLILVGAFQRNSLVATLAALGMI Sbjct: 181 VRYYGGLVSTMPNFSTIFFFFTLANMSLPGTSSFIGEFLILVGAFQRNSLVATLAALGMI 240 Score = 91.3 bits (225), Expect(2) = 3e-46 Identities = 42/45 (93%), Positives = 42/45 (93%) Frame = -3 Query: 137 LGVAYSLWLYNRAVSGNLKPDFLHKFSDPNGREVSIFIPFLVGGA 3 LG AYSLWLYNR VSGNLKPDFLHKFSDPNGREV IFIPFLVGGA Sbjct: 241 LGAAYSLWLYNRVVSGNLKPDFLHKFSDPNGREVFIFIPFLVGGA 285 >ref|YP_004222320.1| hypothetical protein BevumaM_p085 [Beta vulgaris subsp. maritima] gi|346683192|ref|YP_004842126.1| hypothetical protein BemaM_p081 [Beta macrocarpa] gi|317905656|emb|CBJ14052.1| hypothetical protein [Beta vulgaris subsp. maritima] gi|319439834|emb|CBJ17543.1| hypothetical protein [Beta vulgaris subsp. maritima] gi|320148082|emb|CBJ20744.1| hypothetical protein [Beta vulgaris subsp. maritima] gi|345500110|emb|CBX24928.1| hypothetical protein [Beta macrocarpa] gi|384939144|emb|CBL51991.1| hypothetical protein (mitochondrion) [Beta vulgaris subsp. maritima] Length = 134 Score = 119 bits (298), Expect(2) = 3e-46 Identities = 60/60 (100%), Positives = 60/60 (100%) Frame = -1 Query: 316 VRYYGGLVSTMPNFSTIFFFFTLANMSLPGTSSFIGEFLILVGAFQRNSLVATLAALGMI 137 VRYYGGLVSTMPNFSTIFFFFTLANMSLPGTSSFIGEFLILVGAFQRNSLVATLAALGMI Sbjct: 27 VRYYGGLVSTMPNFSTIFFFFTLANMSLPGTSSFIGEFLILVGAFQRNSLVATLAALGMI 86 Score = 91.3 bits (225), Expect(2) = 3e-46 Identities = 42/45 (93%), Positives = 42/45 (93%) Frame = -3 Query: 137 LGVAYSLWLYNRAVSGNLKPDFLHKFSDPNGREVSIFIPFLVGGA 3 LG AYSLWLYNR VSGNLKPDFLHKFSDPNGREV IFIPFLVGGA Sbjct: 87 LGAAYSLWLYNRVVSGNLKPDFLHKFSDPNGREVFIFIPFLVGGA 131 >dbj|BAD66789.1| NADH dehydrogenase subunit 4 [Beta vulgaris subsp. vulgaris] Length = 477 Score = 119 bits (298), Expect(2) = 4e-45 Identities = 60/60 (100%), Positives = 60/60 (100%) Frame = -1 Query: 316 VRYYGGLVSTMPNFSTIFFFFTLANMSLPGTSSFIGEFLILVGAFQRNSLVATLAALGMI 137 VRYYGGLVSTMPNFSTIFFFFTLANMSLPGTSSFIGEFLILVGAFQRNSLVATLAALGMI Sbjct: 346 VRYYGGLVSTMPNFSTIFFFFTLANMSLPGTSSFIGEFLILVGAFQRNSLVATLAALGMI 405 Score = 87.4 bits (215), Expect(2) = 4e-45 Identities = 40/43 (93%), Positives = 40/43 (93%) Frame = -3 Query: 137 LGVAYSLWLYNRAVSGNLKPDFLHKFSDPNGREVSIFIPFLVG 9 LG AYSLWLYNR VSGNLKPDFLHKFSDPNGREV IFIPFLVG Sbjct: 406 LGAAYSLWLYNRVVSGNLKPDFLHKFSDPNGREVFIFIPFLVG 448 >gb|EHK62688.1| hypothetical protein M3S_K18 (mitochondrion) [Sorghum bicolor] Length = 134 Score = 119 bits (298), Expect(2) = 7e-45 Identities = 60/60 (100%), Positives = 60/60 (100%) Frame = -1 Query: 316 VRYYGGLVSTMPNFSTIFFFFTLANMSLPGTSSFIGEFLILVGAFQRNSLVATLAALGMI 137 VRYYGGLVSTMPNFSTIFFFFTLANMSLPGTSSFIGEFLILVGAFQRNSLVATLAALGMI Sbjct: 27 VRYYGGLVSTMPNFSTIFFFFTLANMSLPGTSSFIGEFLILVGAFQRNSLVATLAALGMI 86 Score = 86.7 bits (213), Expect(2) = 7e-45 Identities = 40/45 (88%), Positives = 42/45 (93%) Frame = -3 Query: 137 LGVAYSLWLYNRAVSGNLKPDFLHKFSDPNGREVSIFIPFLVGGA 3 LG AYSLWLYNR VSGNLKPDFL+KFSD NGREVSIF+PFLVGGA Sbjct: 87 LGAAYSLWLYNRVVSGNLKPDFLYKFSDLNGREVSIFLPFLVGGA 131 >ref|YP_717159.1| NADH dehydrogenase subunit 4 [Brassica napus] gi|37591106|dbj|BAC98908.1| NADH dehydrogenase subunit 4 [Brassica napus] Length = 495 Score = 119 bits (298), Expect(2) = 6e-44 Identities = 60/60 (100%), Positives = 60/60 (100%) Frame = -1 Query: 316 VRYYGGLVSTMPNFSTIFFFFTLANMSLPGTSSFIGEFLILVGAFQRNSLVATLAALGMI 137 VRYYGGLVSTMPNFSTIFFFFTLANMSLPGTSSFIGEFLILVGAFQRNSLVATLAALGMI Sbjct: 364 VRYYGGLVSTMPNFSTIFFFFTLANMSLPGTSSFIGEFLILVGAFQRNSLVATLAALGMI 423 Score = 83.6 bits (205), Expect(2) = 6e-44 Identities = 39/43 (90%), Positives = 39/43 (90%) Frame = -3 Query: 137 LGVAYSLWLYNRAVSGNLKPDFLHKFSDPNGREVSIFIPFLVG 9 LG AYSLWLYNR VSGNLKPDFLHKFSD NGREV IFIPFLVG Sbjct: 424 LGAAYSLWLYNRVVSGNLKPDFLHKFSDLNGREVFIFIPFLVG 466