BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043159
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_064081.1| orf288 gene product (mitochondrion) [Beta vulga...   119   3e-46
ref|YP_004222320.1| hypothetical protein BevumaM_p085 [Beta vulg...   119   3e-46
dbj|BAD66789.1| NADH dehydrogenase subunit 4 [Beta vulgaris subs...   119   4e-45
gb|EHK62688.1| hypothetical protein M3S_K18 (mitochondrion) [Sor...   119   7e-45
ref|YP_717159.1| NADH dehydrogenase subunit 4 [Brassica napus] g...   119   6e-44

>ref|NP_064081.1| orf288 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
           gi|323435102|ref|YP_004222319.1| hypothetical protein
           BevumaM_p084 [Beta vulgaris subsp. maritima]
           gi|346683193|ref|YP_004842125.1| hypothetical protein
           BemaM_p080 [Beta macrocarpa] gi|9087330|dbj|BAA99474.1|
           orf288 [Beta vulgaris subsp. vulgaris]
           gi|317905657|emb|CBJ14053.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|319439835|emb|CBJ17544.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
           gi|320148083|emb|CBJ20745.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|345500111|emb|CBX24929.1|
           hypothetical protein [Beta macrocarpa]
           gi|384939143|emb|CBL51990.1| hypothetical protein
           (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 288

 Score =  119 bits (298), Expect(2) = 3e-46
 Identities = 60/60 (100%), Positives = 60/60 (100%)
 Frame = -1

Query: 316 VRYYGGLVSTMPNFSTIFFFFTLANMSLPGTSSFIGEFLILVGAFQRNSLVATLAALGMI 137
           VRYYGGLVSTMPNFSTIFFFFTLANMSLPGTSSFIGEFLILVGAFQRNSLVATLAALGMI
Sbjct: 181 VRYYGGLVSTMPNFSTIFFFFTLANMSLPGTSSFIGEFLILVGAFQRNSLVATLAALGMI 240



 Score = 91.3 bits (225), Expect(2) = 3e-46
 Identities = 42/45 (93%), Positives = 42/45 (93%)
 Frame = -3

Query: 137 LGVAYSLWLYNRAVSGNLKPDFLHKFSDPNGREVSIFIPFLVGGA 3
           LG AYSLWLYNR VSGNLKPDFLHKFSDPNGREV IFIPFLVGGA
Sbjct: 241 LGAAYSLWLYNRVVSGNLKPDFLHKFSDPNGREVFIFIPFLVGGA 285


>ref|YP_004222320.1| hypothetical protein BevumaM_p085 [Beta vulgaris subsp. maritima]
           gi|346683192|ref|YP_004842126.1| hypothetical protein
           BemaM_p081 [Beta macrocarpa]
           gi|317905656|emb|CBJ14052.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|319439834|emb|CBJ17543.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
           gi|320148082|emb|CBJ20744.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|345500110|emb|CBX24928.1|
           hypothetical protein [Beta macrocarpa]
           gi|384939144|emb|CBL51991.1| hypothetical protein
           (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 134

 Score =  119 bits (298), Expect(2) = 3e-46
 Identities = 60/60 (100%), Positives = 60/60 (100%)
 Frame = -1

Query: 316 VRYYGGLVSTMPNFSTIFFFFTLANMSLPGTSSFIGEFLILVGAFQRNSLVATLAALGMI 137
           VRYYGGLVSTMPNFSTIFFFFTLANMSLPGTSSFIGEFLILVGAFQRNSLVATLAALGMI
Sbjct: 27  VRYYGGLVSTMPNFSTIFFFFTLANMSLPGTSSFIGEFLILVGAFQRNSLVATLAALGMI 86



 Score = 91.3 bits (225), Expect(2) = 3e-46
 Identities = 42/45 (93%), Positives = 42/45 (93%)
 Frame = -3

Query: 137 LGVAYSLWLYNRAVSGNLKPDFLHKFSDPNGREVSIFIPFLVGGA 3
           LG AYSLWLYNR VSGNLKPDFLHKFSDPNGREV IFIPFLVGGA
Sbjct: 87  LGAAYSLWLYNRVVSGNLKPDFLHKFSDPNGREVFIFIPFLVGGA 131


>dbj|BAD66789.1| NADH dehydrogenase subunit 4 [Beta vulgaris subsp. vulgaris]
          Length = 477

 Score =  119 bits (298), Expect(2) = 4e-45
 Identities = 60/60 (100%), Positives = 60/60 (100%)
 Frame = -1

Query: 316 VRYYGGLVSTMPNFSTIFFFFTLANMSLPGTSSFIGEFLILVGAFQRNSLVATLAALGMI 137
           VRYYGGLVSTMPNFSTIFFFFTLANMSLPGTSSFIGEFLILVGAFQRNSLVATLAALGMI
Sbjct: 346 VRYYGGLVSTMPNFSTIFFFFTLANMSLPGTSSFIGEFLILVGAFQRNSLVATLAALGMI 405



 Score = 87.4 bits (215), Expect(2) = 4e-45
 Identities = 40/43 (93%), Positives = 40/43 (93%)
 Frame = -3

Query: 137 LGVAYSLWLYNRAVSGNLKPDFLHKFSDPNGREVSIFIPFLVG 9
           LG AYSLWLYNR VSGNLKPDFLHKFSDPNGREV IFIPFLVG
Sbjct: 406 LGAAYSLWLYNRVVSGNLKPDFLHKFSDPNGREVFIFIPFLVG 448


>gb|EHK62688.1| hypothetical protein M3S_K18 (mitochondrion) [Sorghum bicolor]
          Length = 134

 Score =  119 bits (298), Expect(2) = 7e-45
 Identities = 60/60 (100%), Positives = 60/60 (100%)
 Frame = -1

Query: 316 VRYYGGLVSTMPNFSTIFFFFTLANMSLPGTSSFIGEFLILVGAFQRNSLVATLAALGMI 137
           VRYYGGLVSTMPNFSTIFFFFTLANMSLPGTSSFIGEFLILVGAFQRNSLVATLAALGMI
Sbjct: 27  VRYYGGLVSTMPNFSTIFFFFTLANMSLPGTSSFIGEFLILVGAFQRNSLVATLAALGMI 86



 Score = 86.7 bits (213), Expect(2) = 7e-45
 Identities = 40/45 (88%), Positives = 42/45 (93%)
 Frame = -3

Query: 137 LGVAYSLWLYNRAVSGNLKPDFLHKFSDPNGREVSIFIPFLVGGA 3
           LG AYSLWLYNR VSGNLKPDFL+KFSD NGREVSIF+PFLVGGA
Sbjct: 87  LGAAYSLWLYNRVVSGNLKPDFLYKFSDLNGREVSIFLPFLVGGA 131


>ref|YP_717159.1| NADH dehydrogenase subunit 4 [Brassica napus]
           gi|37591106|dbj|BAC98908.1| NADH dehydrogenase subunit 4
           [Brassica napus]
          Length = 495

 Score =  119 bits (298), Expect(2) = 6e-44
 Identities = 60/60 (100%), Positives = 60/60 (100%)
 Frame = -1

Query: 316 VRYYGGLVSTMPNFSTIFFFFTLANMSLPGTSSFIGEFLILVGAFQRNSLVATLAALGMI 137
           VRYYGGLVSTMPNFSTIFFFFTLANMSLPGTSSFIGEFLILVGAFQRNSLVATLAALGMI
Sbjct: 364 VRYYGGLVSTMPNFSTIFFFFTLANMSLPGTSSFIGEFLILVGAFQRNSLVATLAALGMI 423



 Score = 83.6 bits (205), Expect(2) = 6e-44
 Identities = 39/43 (90%), Positives = 39/43 (90%)
 Frame = -3

Query: 137 LGVAYSLWLYNRAVSGNLKPDFLHKFSDPNGREVSIFIPFLVG 9
           LG AYSLWLYNR VSGNLKPDFLHKFSD NGREV IFIPFLVG
Sbjct: 424 LGAAYSLWLYNRVVSGNLKPDFLHKFSDLNGREVFIFIPFLVG 466