BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043147
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFJ66197.1| hypothetical protein 7G9.16 [Boechera stricta]          93   2e-17
ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|2...    92   6e-17
gb|AAD12028.1| putative non-LTR retroelement reverse transcripta...    91   1e-16
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...    91   1e-16
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...    90   2e-16

>gb|AFJ66197.1| hypothetical protein 7G9.16 [Boechera stricta]
          Length = 671

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 45/85 (52%), Positives = 58/85 (68%)
 Frame = -3

Query: 255 DEIIEALACIDSDKSPGNDRFSSLFFKAAWRIVGDEFVRAVQNYFRSSRMLREVNAICIS 76
           +EI   L  +  +KS G D F+  FF+A+W I+G EFV A Q+YF    M R VNA  ++
Sbjct: 414 EEIKHTLFSMPKNKSSGPDGFTPEFFQASWAIIGPEFVIAFQSYFLHGFMPRGVNATTLT 473

Query: 75  LVPKTQTPTSLNDYRPIACCNVIYK 1
           L+PK + PT+L DYRPIACCNVIYK
Sbjct: 474 LIPKVEGPTTLTDYRPIACCNVIYK 498


>ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|222874272|gb|EEF11403.1|
           predicted protein [Populus trichocarpa]
          Length = 503

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 40/84 (47%), Positives = 60/84 (71%)
 Frame = -3

Query: 258 RDEIIEALACIDSDKSPGNDRFSSLFFKAAWRIVGDEFVRAVQNYFRSSRMLREVNAICI 79
           R EI  A+  + ++K+PG D F++ FFK  W IVG++ + AV++ F++ RML+E+NA  I
Sbjct: 416 RKEIKHAMFSLKNNKAPGLDGFNAGFFKRMWHIVGEDVINAVRSLFQTRRMLKEMNATSI 475

Query: 78  SLVPKTQTPTSLNDYRPIACCNVI 7
           SL+PK   PT L D+RPI+CCN +
Sbjct: 476 SLIPKVANPTRLTDFRPISCCNTV 499


>gb|AAD12028.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1447

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 39/85 (45%), Positives = 59/85 (69%)
 Frame = -3

Query: 255  DEIIEALACIDSDKSPGNDRFSSLFFKAAWRIVGDEFVRAVQNYFRSSRMLREVNAICIS 76
            +EI + L  + +DKSPG D F+S FFKA W I+G+EF+ A+Q++F    + + +N   ++
Sbjct: 864  EEIKKVLFSMPNDKSPGPDGFTSEFFKATWEILGNEFILAIQSFFAKGFLPKGINTTILA 923

Query: 75   LVPKTQTPTSLNDYRPIACCNVIYK 1
            L+PK +    + DYRPI+CCNVIYK
Sbjct: 924  LIPKKKEAKEMKDYRPISCCNVIYK 948


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 1223

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 40/85 (47%), Positives = 58/85 (68%)
 Frame = -3

Query: 255 DEIIEALACIDSDKSPGNDRFSSLFFKAAWRIVGDEFVRAVQNYFRSSRMLREVNAICIS 76
           +EI + L  + SDKSPG D ++S FFKA W I+GDEF  AVQ++F    + + +N+  ++
Sbjct: 456 EEIRKVLFRMPSDKSPGPDGYTSEFFKATWEIIGDEFTLAVQSFFTKGFLPKGINSTILA 515

Query: 75  LVPKTQTPTSLNDYRPIACCNVIYK 1
           L+PK      + DYRPI+CCNV+YK
Sbjct: 516 LIPKKTEAREMKDYRPISCCNVLYK 540


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 41/84 (48%), Positives = 57/84 (67%)
 Frame = -3

Query: 252 EIIEALACIDSDKSPGNDRFSSLFFKAAWRIVGDEFVRAVQNYFRSSRMLREVNAICISL 73
           EI EALA I +DK+PG D F++ FFK +W  +  E    +Q +F +SRM R +N I ++L
Sbjct: 442 EIDEALAGIGNDKAPGLDGFNAYFFKKSWGSIKQEIYAGIQEFFNNSRMHRPINCIVVTL 501

Query: 72  VPKTQTPTSLNDYRPIACCNVIYK 1
           +PK Q  T + ++RPIACC VIYK
Sbjct: 502 LPKVQHATRVKEFRPIACCTVIYK 525