BLASTX nr result

ID: Coptis25_contig00043119 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043119
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29206.3| unnamed protein product [Vitis vinifera]              130   1e-28
ref|XP_002269629.1| PREDICTED: long-chain-alcohol oxidase FAO4A-...   130   1e-28
ref|XP_003629014.1| GMC-type oxidoreductase, putative [Medicago ...   117   1e-24
ref|XP_003517097.1| PREDICTED: long-chain-alcohol oxidase FAO4A-...   112   4e-23
ref|XP_002328753.1| predicted protein [Populus trichocarpa] gi|2...   109   3e-22

>emb|CBI29206.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  130 bits (327), Expect = 1e-28
 Identities = 66/138 (47%), Positives = 88/138 (63%), Gaps = 1/138 (0%)
 Frame = -1

Query: 411 GGKPPSPNTLSPRQMESLVAICDTFMPSIDM-HDTGDEDLRRFYMTSASMIGVPEHYGGY 235
           GG+    N LS R+MESL+AI DTF+PS++  H+     + +FY TSASM G P   GG 
Sbjct: 26  GGRQLYLNKLSSREMESLIAISDTFLPSVEAPHNAAHAYVDKFYRTSASMAGTPHIVGGL 85

Query: 234 VCXXXXXXXXXXXXXXXXXLSTWYGTFFICGTASLSNRFPYFQRFSMVSQKRREEIVVSW 55
           +                  LSTW+GTF ICG AS+S+ FPYFQ F  VS  +R EIV+SW
Sbjct: 86  ISERLEHPKLWLSRVVLWLLSTWFGTFIICGLASMSSHFPYFQSFPQVSPHKRHEIVLSW 145

Query: 54  SMSYFSILKMLYKSLKFL 1
           S+SYFS+++ML++SLK +
Sbjct: 146 SLSYFSLIRMLFRSLKLV 163


>ref|XP_002269629.1| PREDICTED: long-chain-alcohol oxidase FAO4A-like [Vitis vinifera]
          Length = 793

 Score =  130 bits (327), Expect = 1e-28
 Identities = 66/138 (47%), Positives = 88/138 (63%), Gaps = 1/138 (0%)
 Frame = -1

Query: 411 GGKPPSPNTLSPRQMESLVAICDTFMPSIDM-HDTGDEDLRRFYMTSASMIGVPEHYGGY 235
           GG+    N LS R+MESL+AI DTF+PS++  H+     + +FY TSASM G P   GG 
Sbjct: 26  GGRQLYLNKLSSREMESLIAISDTFLPSVEAPHNAAHAYVDKFYRTSASMAGTPHIVGGL 85

Query: 234 VCXXXXXXXXXXXXXXXXXLSTWYGTFFICGTASLSNRFPYFQRFSMVSQKRREEIVVSW 55
           +                  LSTW+GTF ICG AS+S+ FPYFQ F  VS  +R EIV+SW
Sbjct: 86  ISERLEHPKLWLSRVVLWLLSTWFGTFIICGLASMSSHFPYFQSFPQVSPHKRHEIVLSW 145

Query: 54  SMSYFSILKMLYKSLKFL 1
           S+SYFS+++ML++SLK +
Sbjct: 146 SLSYFSLIRMLFRSLKLV 163


>ref|XP_003629014.1| GMC-type oxidoreductase, putative [Medicago truncatula]
           gi|355523036|gb|AET03490.1| GMC-type oxidoreductase,
           putative [Medicago truncatula]
          Length = 810

 Score =  117 bits (292), Expect = 1e-24
 Identities = 58/137 (42%), Positives = 85/137 (62%), Gaps = 3/137 (2%)
 Frame = -1

Query: 402 PPSPNTLSPRQMESLVAICDTFMPSIDMHD---TGDEDLRRFYMTSASMIGVPEHYGGYV 232
           PP  N+LSP QM+SLVA+CDT +PSI  ++   + DE L  FY TSASM G PE     V
Sbjct: 54  PPLRNSLSPTQMKSLVALCDTMLPSIKDNNVAASSDEFLNNFYRTSASMAGTPELVANLV 113

Query: 231 CXXXXXXXXXXXXXXXXXLSTWYGTFFICGTASLSNRFPYFQRFSMVSQKRREEIVVSWS 52
                             LSTW+GT  +CG AS+S +FP+F  +  +S ++R+++++SWS
Sbjct: 114 SEKLKHPSTWLLKLTLWLLSTWFGTLILCGIASISTKFPFFHSYPKLSPEKRQKVMLSWS 173

Query: 51  MSYFSILKMLYKSLKFL 1
           +SY   L+ML++++K L
Sbjct: 174 VSYLRPLRMLFRTIKLL 190


>ref|XP_003517097.1| PREDICTED: long-chain-alcohol oxidase FAO4A-like [Glycine max]
          Length = 809

 Score =  112 bits (279), Expect = 4e-23
 Identities = 54/134 (40%), Positives = 78/134 (58%), Gaps = 1/134 (0%)
 Frame = -1

Query: 399 PSPNTLSPRQMESLVAICDTFMPSIDMH-DTGDEDLRRFYMTSASMIGVPEHYGGYVCXX 223
           P  NTLSPRQM+SL A+CDT +PS+D   DT DE + +FY  SASM G PE +G  +   
Sbjct: 56  PLTNTLSPRQMKSLYALCDTILPSVDHFVDTSDESVTKFYQISASMTGTPERFGCMISEK 115

Query: 222 XXXXXXXXXXXXXXXLSTWYGTFFICGTASLSNRFPYFQRFSMVSQKRREEIVVSWSMSY 43
                          LSTW+GT   CG    S +FP+   +  +  ++R++I+ SWS+SY
Sbjct: 116 LKHPLTGLLKFVLWLLSTWFGTLIFCGMGCFSTQFPFIHTYPDLPLQKRQQIMRSWSLSY 175

Query: 42  FSILKMLYKSLKFL 1
               +ML++++K L
Sbjct: 176 LRHFRMLFRTIKLL 189


>ref|XP_002328753.1| predicted protein [Populus trichocarpa] gi|222839051|gb|EEE77402.1|
           predicted protein [Populus trichocarpa]
          Length = 748

 Score =  109 bits (272), Expect = 3e-22
 Identities = 56/131 (42%), Positives = 72/131 (54%), Gaps = 8/131 (6%)
 Frame = -1

Query: 369 MESLVAICDTFMPSI--------DMHDTGDEDLRRFYMTSASMIGVPEHYGGYVCXXXXX 214
           MESL AICDT  PS+           D     +  FY +SASM G P+  G   C     
Sbjct: 1   MESLTAICDTLFPSVYNSSMMAASADDGSTNSISTFYQSSASMAGTPQRVGELFCDRVQH 60

Query: 213 XXXXXXXXXXXXLSTWYGTFFICGTASLSNRFPYFQRFSMVSQKRREEIVVSWSMSYFSI 34
                       LSTW GTF +CG  S+S  FPYF RFS +SQ +RE+IV SW+ S+F +
Sbjct: 61  PKKWLIRLTLYLLSTWIGTFILCGLPSISPSFPYFLRFSQISQSKREQIVFSWATSFFYL 120

Query: 33  LKMLYKSLKFL 1
           L+ML+KS+K +
Sbjct: 121 LRMLFKSIKLV 131


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