BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043116
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284293.1| PREDICTED: pentatricopeptide repeat-containi...   108   6e-22
ref|XP_002867987.1| binding protein [Arabidopsis lyrata subsp. l...   102   4e-20
emb|CBI19104.3| unnamed protein product [Vitis vinifera]              102   4e-20
ref|NP_193587.4| pentatricopeptide repeat-containing protein [Ar...   102   4e-20
ref|XP_002307403.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19

>ref|XP_002284293.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g18520-like [Vitis vinifera]
          Length = 595

 Score =  108 bits (269), Expect = 6e-22
 Identities = 50/59 (84%), Positives = 54/59 (91%)
 Frame = +1

Query: 1   FDSMPERNEVSWKAMILGYARNGFCREALQLMYRMQAEGIKVDDYTQTTVLSACGDVEW 177
           FDSMP+RN VSWKAMI+GYARNG C EAL+LMYRMQAEGI+VDDY  TTVLSACGDVEW
Sbjct: 524 FDSMPQRNLVSWKAMIVGYARNGLCGEALKLMYRMQAEGIEVDDYILTTVLSACGDVEW 582


>ref|XP_002867987.1| binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297313823|gb|EFH44246.1| binding protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 616

 Score =  102 bits (253), Expect = 4e-20
 Identities = 45/58 (77%), Positives = 52/58 (89%)
 Frame = +1

Query: 1   FDSMPERNEVSWKAMILGYARNGFCREALQLMYRMQAEGIKVDDYTQTTVLSACGDVE 174
           FDSMPE+N VSWKAMI+GYARNGFCREAL+LMYRM+AEG +VDDY   T+LS CGD+E
Sbjct: 544 FDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCGDIE 601


>emb|CBI19104.3| unnamed protein product [Vitis vinifera]
          Length = 457

 Score =  102 bits (253), Expect = 4e-20
 Identities = 47/56 (83%), Positives = 51/56 (91%)
 Frame = +1

Query: 10  MPERNEVSWKAMILGYARNGFCREALQLMYRMQAEGIKVDDYTQTTVLSACGDVEW 177
           MP+RN VSWKAMI+GYARNG C EAL+LMYRMQAEGI+VDDY  TTVLSACGDVEW
Sbjct: 389 MPQRNLVSWKAMIVGYARNGLCGEALKLMYRMQAEGIEVDDYILTTVLSACGDVEW 444


>ref|NP_193587.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|122236144|sp|Q0WNP3.1|PP319_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g18520 gi|110738662|dbj|BAF01256.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332658657|gb|AEE84057.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 617

 Score =  102 bits (253), Expect = 4e-20
 Identities = 45/58 (77%), Positives = 52/58 (89%)
 Frame = +1

Query: 1   FDSMPERNEVSWKAMILGYARNGFCREALQLMYRMQAEGIKVDDYTQTTVLSACGDVE 174
           FDSMPE+N VSWKAMI+GYARNGFCREAL+LMYRM+AEG +VDDY   T+LS CGD+E
Sbjct: 544 FDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCGDIE 601


>ref|XP_002307403.1| predicted protein [Populus trichocarpa] gi|222856852|gb|EEE94399.1|
           predicted protein [Populus trichocarpa]
          Length = 472

 Score =  100 bits (248), Expect = 2e-19
 Identities = 43/59 (72%), Positives = 51/59 (86%)
 Frame = +1

Query: 1   FDSMPERNEVSWKAMILGYARNGFCREALQLMYRMQAEGIKVDDYTQTTVLSACGDVEW 177
           FDSMPERN V+W+AMI+GY RNG C+EAL+LMYRMQAEGI+VDDY    VL ACG++EW
Sbjct: 401 FDSMPERNLVTWRAMIMGYVRNGLCQEALKLMYRMQAEGIQVDDYISAKVLGACGEIEW 459