BLASTX nr result

ID: Coptis25_contig00043114 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043114
         (430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155274.1| PREDICTED: AP2-like ethylene-responsive tran...    77   2e-12
ref|XP_004134266.1| PREDICTED: AP2-like ethylene-responsive tran...    77   2e-12
ref|XP_003635541.1| PREDICTED: AP2-like ethylene-responsive tran...    70   2e-10
ref|XP_003635476.1| PREDICTED: AP2-like ethylene-responsive tran...    70   2e-10

>ref|XP_004155274.1| PREDICTED: AP2-like ethylene-responsive transcription factor
           AIL6-like [Cucumis sativus]
          Length = 517

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 49/122 (40%), Positives = 61/122 (50%), Gaps = 6/122 (4%)
 Frame = +3

Query: 3   NFEMNRYDVDAIANSALPIGXXXXXXXXXXXXXXXXXIPITNHD-----FQRXXXXXXXX 167
           NFEM+RYDV+AIA SALPIG                  PI NHD                
Sbjct: 395 NFEMSRYDVEAIAKSALPIGGAAKRLKLCLESDQK---PIPNHDQATQCSSGSNNINFGT 451

Query: 168 XIVALPNVSCGVSYDTASAALYHQNLLHHYHSNAVGSSDSTS-STAIPLLPQPEYCSRNF 344
            + A+P + CG+ YDTA A LYH N  HH   NA+GSS+STS   A+P    P   +  F
Sbjct: 452 AMQAVPPIPCGIPYDTA-AVLYHHNYFHHLQPNAIGSSESTSPGIAVPGTVGPHQAAEFF 510

Query: 345 LY 350
           ++
Sbjct: 511 VW 512


>ref|XP_004134266.1| PREDICTED: AP2-like ethylene-responsive transcription factor
           AIL6-like [Cucumis sativus]
          Length = 516

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 49/122 (40%), Positives = 61/122 (50%), Gaps = 6/122 (4%)
 Frame = +3

Query: 3   NFEMNRYDVDAIANSALPIGXXXXXXXXXXXXXXXXXIPITNHD-----FQRXXXXXXXX 167
           NFEM+RYDV+AIA SALPIG                  PI NHD                
Sbjct: 394 NFEMSRYDVEAIAKSALPIGGAAKRLKLCLESDQK---PIPNHDQATQCSSGSNNINFGT 450

Query: 168 XIVALPNVSCGVSYDTASAALYHQNLLHHYHSNAVGSSDSTS-STAIPLLPQPEYCSRNF 344
            + A+P + CG+ YDTA A LYH N  HH   NA+GSS+STS   A+P    P   +  F
Sbjct: 451 AMQAVPPIPCGIPYDTA-AVLYHHNYFHHLQPNAIGSSESTSPGIAVPGTVGPHQAAEFF 509

Query: 345 LY 350
           ++
Sbjct: 510 VW 511


>ref|XP_003635541.1| PREDICTED: AP2-like ethylene-responsive transcription factor
           AIL6-like [Vitis vinifera]
          Length = 516

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 48/117 (41%), Positives = 62/117 (52%), Gaps = 10/117 (8%)
 Frame = +3

Query: 3   NFEMNRYDVDAIANSALPIGXXXXXXXXXXXXXXXXXIPITNHDFQ----RXXXXXXXXX 170
           NFEMNRYDV+AIANSALPIG                  P  N D Q              
Sbjct: 393 NFEMNRYDVEAIANSALPIGGAAKRLKLSLESDQK---PCLNLDQQTQSSASSSGITFGA 449

Query: 171 IVALPNVSCGVSYDTASAALYHQNLLHHYHSNAVGSSDS--TSSTAIP----LLPQP 323
           I  +P + CG+  DTA+ A YH NL +H HS+ +G+S+S  T+S+++P    LLP P
Sbjct: 450 IQPIPAIPCGIPLDTAT-AFYHHNLFNHLHSSNMGASNSPGTTSSSMPTPMALLPPP 505


>ref|XP_003635476.1| PREDICTED: AP2-like ethylene-responsive transcription factor
           AIL6-like [Vitis vinifera]
          Length = 458

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 48/117 (41%), Positives = 62/117 (52%), Gaps = 10/117 (8%)
 Frame = +3

Query: 3   NFEMNRYDVDAIANSALPIGXXXXXXXXXXXXXXXXXIPITNHDFQ----RXXXXXXXXX 170
           NFEMNRYDV+AIANSALPIG                  P  N D Q              
Sbjct: 335 NFEMNRYDVEAIANSALPIGGAAKRLKLSLESDQK---PCLNLDQQTQSSASSSGITFGA 391

Query: 171 IVALPNVSCGVSYDTASAALYHQNLLHHYHSNAVGSSDS--TSSTAIP----LLPQP 323
           I  +P + CG+  DTA+ A YH NL +H HS+ +G+S+S  T+S+++P    LLP P
Sbjct: 392 IQPIPAIPCGIPLDTAT-AFYHHNLFNHLHSSNMGASNSPGTTSSSMPTPMALLPPP 447


Top