BLASTX nr result

ID: Coptis25_contig00043107 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043107
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134263.1| PREDICTED: uncharacterized protein LOC101217...    87   1e-15
gb|AAG50653.1|AC073433_5 hypothetical protein [Arabidopsis thali...    86   2e-15
dbj|BAB03186.1| En/Spm transposon protein-like [Arabidopsis thal...    82   3e-14
gb|AAG60150.1|AC074360_15 En/Spm-like transposon protein, putati...    75   7e-12
ref|XP_002328708.1| predicted protein [Populus trichocarpa] gi|2...    69   3e-10

>ref|XP_004134263.1| PREDICTED: uncharacterized protein LOC101217008 [Cucumis sativus]
          Length = 1163

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 45/98 (45%), Positives = 68/98 (69%), Gaps = 2/98 (2%)
 Frame = -2

Query: 388  QEKRKKFKEMRAKQTITYTSSRKGYARLEAEMKNQSANPSSVSRTDVWEKAHTRKDGQPA 209
            Q K +KFK M+ KQ + +T SRKGYARL  EMK    + SSVSR  VW KAH +KDG P 
Sbjct: 840  QAKSEKFKSMKKKQ-LPHTCSRKGYARLAEEMKKGCPDSSSVSRVAVWAKAHRKKDGNPV 898

Query: 208  NAEVAEKMKKIQEL--KASTPNSSSLKDDALSQVLGPE 101
            N++VAE +++I+++  +     S+++ ++A+S+VLG +
Sbjct: 899  NSQVAEALERIEQIDNEGIKTTSNNVGNEAISKVLGSD 936



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 34/84 (40%), Positives = 52/84 (61%), Gaps = 3/84 (3%)
 Frame = -2

Query: 403 ESEEYQEKRKKFKEMRAKQTITYTSSRKGYARLEAEMKNQSANPSSVSRTDVWEKAHTRK 224
           +S  ++ K +KFK M+ K  + +T SRKGYARL  EM+    + SSV+R  +  KAH +K
Sbjct: 566 KSATFKAKSEKFKSMK-KMQLPHTCSRKGYARLAEEMRKSCLDSSSVTRIALLAKAHRKK 624

Query: 223 DGQPANAEVAEKM---KKIQELKA 161
           D  P N++V E +   KK+ ++ A
Sbjct: 625 DENPVNSQVTETLGMEKKLSDMVA 648


>gb|AAG50653.1|AC073433_5 hypothetical protein [Arabidopsis thaliana]
          Length = 623

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 50/132 (37%), Positives = 75/132 (56%), Gaps = 1/132 (0%)
 Frame = -2

Query: 400 SEEYQEKRKKFKEMRAKQTITYTSSRKGYARLEAEMKNQSANPSSVSRTDVWEKAHTRKD 221
           S+E++     +KE R+KQ I++T+SR+G  RL   MK +S NPS VSR  VW K+ TRKD
Sbjct: 226 SKEFKVVSDSYKERRSKQ-ISHTTSRRGMVRLAEHMKKESPNPSEVSRLQVWIKSRTRKD 284

Query: 220 GQPANAEVAEKMKKIQELKASTPNSSSLK-DDALSQVLGPEXXXXXXXXXXXVTPSKLGL 44
           G P N    EK+   + +K+ TP+S+  +  D+LSQ+LGP+              +KL  
Sbjct: 285 GTPVNTNTGEKIAS-EIVKSDTPSSACFEGQDSLSQLLGPDNPGRMRAMGRNKNKTKLAC 343

Query: 43  APKSNEKVDQLE 8
               N+ + + E
Sbjct: 344 FQMKNKCMAETE 355


>dbj|BAB03186.1| En/Spm transposon protein-like [Arabidopsis thaliana]
          Length = 1516

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 49/130 (37%), Positives = 74/130 (56%), Gaps = 2/130 (1%)
 Frame = -2

Query: 391  YQEKRKKFKEMRAKQTITYTSSRKGYARLEAEMKNQSANPSSVSRTDVWEKAHTRKDGQP 212
            ++E   K++ +R  Q I +T+SRKG   L  EMK +S+NP  V+R+ VW   HT  DG+P
Sbjct: 1057 FKEISDKYRMLRKAQ-IPHTTSRKGMISLAHEMKKKSSNPKLVTRSKVWIAGHTHSDGRP 1115

Query: 211  ANAEVAEKMKKIQELKASTPNSS--SLKDDALSQVLGPEXXXXXXXXXXXVTPSKLGLAP 38
               E AE ++KI+ + +   +SS   LK+DA+SQVLG +           VT +KL    
Sbjct: 1116 VKPEFAETIEKIKSIDSEMDSSSFTDLKEDAVSQVLGKDKPGRLRGMGRGVTATKLAFML 1175

Query: 37   KSNEKVDQLE 8
              +  V++LE
Sbjct: 1176 ARDSHVEKLE 1185


>gb|AAG60150.1|AC074360_15 En/Spm-like transposon protein, putative [Arabidopsis thaliana]
          Length = 1431

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 42/124 (33%), Positives = 67/124 (54%)
 Frame = -2

Query: 373  KFKEMRAKQTITYTSSRKGYARLEAEMKNQSANPSSVSRTDVWEKAHTRKDGQPANAEVA 194
            K+KE R  Q I +T+SRKG  RL  +MK +S +PS V+R   W K+ T+KDG P N   A
Sbjct: 1051 KYKERRRNQ-IPHTTSRKGMVRLAEDMKLESGDPSEVTRLKFWVKSRTKKDGTPVNTNAA 1109

Query: 193  EKMKKIQELKASTPNSSSLKDDALSQVLGPEXXXXXXXXXXXVTPSKLGLAPKSNEKVDQ 14
            E++          P S++ ++D LSQ+LGP+           ++ +KL       + +  
Sbjct: 1110 EQIAAELVGSDGPPTSANPEEDHLSQLLGPDNPGRLRAMSRGMSKTKLACLQVKRKCMTD 1169

Query: 13   LEQE 2
            +E++
Sbjct: 1170 MEEK 1173


>ref|XP_002328708.1| predicted protein [Populus trichocarpa] gi|222839006|gb|EEE77357.1|
           predicted protein [Populus trichocarpa]
          Length = 327

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 41/120 (34%), Positives = 61/120 (50%), Gaps = 3/120 (2%)
 Frame = -2

Query: 400 SEEYQEKRKKFKEMRAKQTITYTSSRKGYARLEAEMKNQSANPSSVSRTDVWEKAHTRKD 221
           SEE Q +  K K  R+ Q  T+T+  K +AR+  E + + +     +R +++ K  TRKD
Sbjct: 129 SEEAQLRSAKNKANRSNQKSTHTAGSKSFARIREEERTKKSGGKEPTRAELYIKTRTRKD 188

Query: 220 GQPAN---AEVAEKMKKIQELKASTPNSSSLKDDALSQVLGPEXXXXXXXXXXXVTPSKL 50
           GQP N   AE+  K+++ +  K  T N S+  DDA  QV+G E             PS L
Sbjct: 189 GQPMNNVAAEIISKLREQETQKQQTSNDSNDWDDAFFQVMGEEKNGHVRTYGLGPNPSDL 248


Top