BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043091
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_188968.1| regulator of chromosome condensation-like prote...   116   2e-24
dbj|BAA95740.1| chromosome condensation regulator-like protein p...   116   2e-24
ref|XP_002883417.1| regulator of chromosome condensation family ...   115   4e-24
ref|NP_001154232.2| regulator of chromosome condensation repeat-...   114   8e-24
ref|XP_002281342.2| PREDICTED: uncharacterized protein LOC100254...   113   2e-23

>ref|NP_188968.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
           gi|332643224|gb|AEE76745.1| regulator of chromosome
           condensation-like protein with FYVE zinc finger domain
           [Arabidopsis thaliana]
          Length = 1045

 Score =  116 bits (290), Expect = 2e-24
 Identities = 61/93 (65%), Positives = 68/93 (73%), Gaps = 7/93 (7%)
 Frame = -2

Query: 259 SDVGSVRASMSRTSTDGFRFSVSSQ------GSGPDDTESLGDVYVWGAVWSDGI-TNNS 101
           SDVG  R +M R STDGFR SVSS       GSGPDD ESLGDVYVWG VW++GI  + +
Sbjct: 170 SDVGYERGNMLRPSTDGFRISVSSTPSCSSGGSGPDDIESLGDVYVWGEVWTEGILPDGT 229

Query: 100 GSPHLSKTDVLLPKPLKSNVVLDVHQIACGVRH 2
            S    KTDVL P+PL+SNVVLDVHQI CGVRH
Sbjct: 230 ASNETVKTDVLTPRPLESNVVLDVHQIVCGVRH 262


>dbj|BAA95740.1| chromosome condensation regulator-like protein protein [Arabidopsis
           thaliana]
          Length = 1067

 Score =  116 bits (290), Expect = 2e-24
 Identities = 61/93 (65%), Positives = 68/93 (73%), Gaps = 7/93 (7%)
 Frame = -2

Query: 259 SDVGSVRASMSRTSTDGFRFSVSSQ------GSGPDDTESLGDVYVWGAVWSDGI-TNNS 101
           SDVG  R +M R STDGFR SVSS       GSGPDD ESLGDVYVWG VW++GI  + +
Sbjct: 179 SDVGYERGNMLRPSTDGFRISVSSTPSCSSGGSGPDDIESLGDVYVWGEVWTEGILPDGT 238

Query: 100 GSPHLSKTDVLLPKPLKSNVVLDVHQIACGVRH 2
            S    KTDVL P+PL+SNVVLDVHQI CGVRH
Sbjct: 239 ASNETVKTDVLTPRPLESNVVLDVHQIVCGVRH 271


>ref|XP_002883417.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata] gi|297329257|gb|EFH59676.1|
           regulator of chromosome condensation family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1043

 Score =  115 bits (288), Expect = 4e-24
 Identities = 61/93 (65%), Positives = 68/93 (73%), Gaps = 7/93 (7%)
 Frame = -2

Query: 259 SDVGSVRASMSRTSTDGFRFSVSSQ------GSGPDDTESLGDVYVWGAVWSDGI-TNNS 101
           SDVG  R +M R STDGFR SVSS       GSGPDD ESLGDVYVWG VW++GI  + +
Sbjct: 170 SDVGYERGNMLRPSTDGFRISVSSTPSCSSGGSGPDDIESLGDVYVWGEVWTEGILPDGT 229

Query: 100 GSPHLSKTDVLLPKPLKSNVVLDVHQIACGVRH 2
            S    KTDVL P+PL+SNVVLDVHQI CGVRH
Sbjct: 230 VSKETVKTDVLTPRPLESNVVLDVHQIVCGVRH 262


>ref|NP_001154232.2| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana] gi|332658030|gb|AEE83430.1|
           regulator of chromosome condensation repeat-containing
           protein [Arabidopsis thaliana]
          Length = 1106

 Score =  114 bits (285), Expect = 8e-24
 Identities = 62/93 (66%), Positives = 68/93 (73%), Gaps = 7/93 (7%)
 Frame = -2

Query: 259 SDVGSVRASMSRTSTDGFRFSVSSQGS------GPDDTESLGDVYVWGAVWSDGITNNSG 98
           SDVG  R +M R STDGFR SVSS  S      GPDD ESLGDVYVWG VWSDGI+ +  
Sbjct: 189 SDVGYERGNMLRPSTDGFRISVSSTPSCSTGTSGPDDIESLGDVYVWGEVWSDGISPDGV 248

Query: 97  SPHLS-KTDVLLPKPLKSNVVLDVHQIACGVRH 2
               + K DVL+PKPL+SNVVLDVHQIACGVRH
Sbjct: 249 VNSTTVKIDVLIPKPLESNVVLDVHQIACGVRH 281


>ref|XP_002281342.2| PREDICTED: uncharacterized protein LOC100254552 [Vitis vinifera]
          Length = 1082

 Score =  113 bits (282), Expect = 2e-23
 Identities = 66/105 (62%), Positives = 72/105 (68%), Gaps = 9/105 (8%)
 Frame = -2

Query: 289 SSDLTKDLTGSDVGSVRASMS-RTS-TDGFRFSVSS------QGSGPDDTESLGDVYVWG 134
           S D + +   SD GS R +M  RTS  DGFR SVSS      QGSGPDD ESLGDVYVWG
Sbjct: 174 SRDSSLNWASSDAGSERTNMQLRTSGVDGFRISVSSTPSCSSQGSGPDDIESLGDVYVWG 233

Query: 133 AVWSDGI-TNNSGSPHLSKTDVLLPKPLKSNVVLDVHQIACGVRH 2
            VW DG+  + S SP   K DVL PK L+SNVVLDVHQIACGVRH
Sbjct: 234 EVWCDGVLPDGSVSPFPIKIDVLTPKSLESNVVLDVHQIACGVRH 278