BLASTX nr result

ID: Coptis25_contig00043082 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043082
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABO28522.1| kinesin-related protein [Gossypium hirsutum]            95   7e-18
ref|XP_002523135.1| kinesin heavy chain, putative [Ricinus commu...    91   1e-16
ref|XP_002318969.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
ref|XP_002302736.1| predicted protein [Populus trichocarpa] gi|2...    82   3e-14
ref|XP_004152236.1| PREDICTED: kinesin-4-like [Cucumis sativus]        81   1e-13

>gb|ABO28522.1| kinesin-related protein [Gossypium hirsutum]
          Length = 1015

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 46/103 (44%), Positives = 67/103 (65%), Gaps = 3/103 (2%)
 Frame = -2

Query: 304  TSKVFPDQPYNRFLACNRFETTSTDDSEDLEASTSDNSEPDLLWQIN---LPKVSNGVGS 134
            +SK++P++ YN FL  N F   S DD +D++ +TSD+SEPDLLWQ N   L  ++NG+ S
Sbjct: 897  SSKIYPEKSYNMFLGANGFNMASADDIDDIDVATSDSSEPDLLWQFNSTKLSSITNGIES 956

Query: 133  KIKKPLPMLGRSQSAVYRSSIPTFIPSPARKVLNGYRPPLHQN 5
            K K+P P   R+   + ++  P   PSP+RK+ NG   PLH+N
Sbjct: 957  KTKRPTPKSARNPD-MSKNLHPMSGPSPSRKLANGAGQPLHRN 998


>ref|XP_002523135.1| kinesin heavy chain, putative [Ricinus communis]
            gi|223537697|gb|EEF39320.1| kinesin heavy chain, putative
            [Ricinus communis]
          Length = 1012

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 47/104 (45%), Positives = 68/104 (65%), Gaps = 3/104 (2%)
 Frame = -2

Query: 304  TSKVFPDQPYNRFLACNRFETTSTDDSEDLEASTSDNSEPDLLWQINLPKVSN---GVGS 134
            +S+++P+Q YN F   NRF  ++TDD +DL+A TSD+SEPDLLWQ N  K+S    G+ S
Sbjct: 895  SSRIYPEQSYNMFTGNNRFNMSNTDDIDDLDAGTSDSSEPDLLWQFNQSKLSGTAYGIES 954

Query: 133  KIKKPLPMLGRSQSAVYRSSIPTFIPSPARKVLNGYRPPLHQNG 2
            K KKP      ++++  R+  P   PSP+RK+ NG   P H++G
Sbjct: 955  KTKKPNSK--ATKNSDLRNLNPMLGPSPSRKLPNGVGVPQHRSG 996


>ref|XP_002318969.1| predicted protein [Populus trichocarpa] gi|222857345|gb|EEE94892.1|
            predicted protein [Populus trichocarpa]
          Length = 981

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 53/115 (46%), Positives = 71/115 (61%), Gaps = 15/115 (13%)
 Frame = -2

Query: 301  SKVFPDQPYNRF----------LACNRFETTSTDDSEDLEASTSDNSEPDLLWQINLPKV 152
            SK++P+QPY                 RFE  STD+S++LEA+TSD+SEPDLLWQ N+P++
Sbjct: 852  SKIYPEQPYKSSPNTRDSQEYDAQRGRFEMASTDESDELEAATSDSSEPDLLWQSNIPRM 911

Query: 151  S-----NGVGSKIKKPLPMLGRSQSAVYRSSIPTFIPSPARKVLNGYRPPLHQNG 2
            S     N +GSK KK     G  +S   RS IP+ IPSP+RK+ NG  P L++ G
Sbjct: 912  SSLPNPNVLGSKTKKTTNPRG-FKSTETRSLIPSLIPSPSRKLPNGASPGLNKPG 965


>ref|XP_002302736.1| predicted protein [Populus trichocarpa] gi|222844462|gb|EEE82009.1|
            predicted protein [Populus trichocarpa]
          Length = 1003

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 42/103 (40%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
 Frame = -2

Query: 304  TSKVFPDQPYNRFLACNRFETTSTDDSEDLEASTSDNSEPDLLWQINLPK---VSNGVGS 134
            +SK++P+Q YN F   N+    + DD +D++A+TSD+SEPDLLWQ N  K   ++NG+ S
Sbjct: 885  SSKIYPEQSYNMFAGNNQINLANNDDMDDIDAATSDSSEPDLLWQFNQSKFTGITNGIDS 944

Query: 133  KIKKPLPMLGRSQSAVYRSSIPTFIPSPARKVLNGYRPPLHQN 5
            K  K +    R+   + ++  P+  PSP+RK  NG   P  QN
Sbjct: 945  KTSKAISKAARNPE-LSKNLNPSLGPSPSRKSGNGVGVPPQQN 986


>ref|XP_004152236.1| PREDICTED: kinesin-4-like [Cucumis sativus]
          Length = 1022

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 46/108 (42%), Positives = 65/108 (60%), Gaps = 7/108 (6%)
 Frame = -2

Query: 304  TSKVFPDQPYNRFLACNRFETTSTDDSEDLEASTSDNSEPDLLWQIN---LPKVSNGVGS 134
            +SK++ +Q Y+     NRF     DD +DL+A TSD+SEPDLLWQ N   L  + +G+GS
Sbjct: 901  SSKLYTEQGYSMLTGANRFNMVGIDDIDDLDAGTSDSSEPDLLWQFNQSKLTSIGSGIGS 960

Query: 133  KIKKP---LPMLGRSQSAVYRSSIPTFIPSPARKVLNGYRP-PLHQNG 2
            K KKP    P+     S  + SS+    PSP++K+ NG    PLH++G
Sbjct: 961  KTKKPNSGKPVKSPELSKNFNSSMG---PSPSQKMSNGVAALPLHRSG 1005


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