BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043065
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003605465.1| F-box/kelch-repeat protein [Medicago truncat...    70   1e-10
emb|CBI40164.3| unnamed protein product [Vitis vinifera]               68   9e-10
ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...    67   2e-09
ref|XP_003611186.1| F-box/kelch-repeat protein [Medicago truncat...    66   3e-09
ref|XP_003621455.1| F-box protein [Medicago truncatula] gi|35549...    65   6e-09

>ref|XP_003605465.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355506520|gb|AES87662.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 369

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 40/122 (32%), Positives = 70/122 (57%), Gaps = 3/122 (2%)
 Frame = +2

Query: 2   EVAVYSVNHASCTTVISNIPYQLLRRKESWVFLNGALHWLGY--AKDNFSKTIVSLNVGD 175
           +V +Y+++  S    I++ P   L      + ++G ++W  Y  A  +FS+ IVSL++G 
Sbjct: 174 QVNIYTLDTHSWKR-INDFPSIPLNGLSEGIIVSGTVNWFAYSTASGDFSRVIVSLDLGK 232

Query: 176 KVFRDFSRPNVGVDETAFMTVGVWGGELCLL-YSHHFDIDIEIWVMKNYGQSESWIKLFA 352
           + +++ S PN   ++  ++T+G+    LC+  YSH F    ++W+MK YG  ESWIKL  
Sbjct: 233 ECYQEISEPNYD-EKPIYLTLGMMRDCLCIFSYSHSFT---DVWLMKEYGNKESWIKLIH 288

Query: 353 FP 358
            P
Sbjct: 289 LP 290


>emb|CBI40164.3| unnamed protein product [Vitis vinifera]
          Length = 423

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 41/121 (33%), Positives = 64/121 (52%), Gaps = 5/121 (4%)
 Frame = +2

Query: 2   EVAVYSVNHASCTTVISNIPYQLLRRKESWVFLNGALHWLGYAK---DNFSKTIVSLNVG 172
           E  VYS+   S   V +NI   +     S  F+NGALHWL   K   DN    I+S ++ 
Sbjct: 192 EADVYSLRTGSWRKVDANICCYI-HSNVSRTFINGALHWLAGKKNEMDNTDNLILSFDMA 250

Query: 173 DKVFRDFSRPNVGVDETAFMTVGVWGGELCLLY--SHHFDIDIEIWVMKNYGQSESWIKL 346
             VF++   P+ G DE     +  + G L +L+  ++H + + ++WVM+ YG ++SW K 
Sbjct: 251 KDVFKEIMLPDFGYDELIRKCLADYKGSLSVLFYDAYHSNENCDVWVMEEYGVAKSWTKH 310

Query: 347 F 349
           F
Sbjct: 311 F 311


>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 41/119 (34%), Positives = 68/119 (57%), Gaps = 2/119 (1%)
 Frame = +2

Query: 2   EVAVYSVNHASCTTVISNIPYQLLRRKESWVFLNGALHWL--GYAKDNFSKTIVSLNVGD 175
           EV VYS+   S    I ++PY +     + VF NGALHW+     + N +  +V+L++G 
Sbjct: 179 EVKVYSLRKQSWRR-IGDMPYCVHYPGANGVFANGALHWVVGENPESNVANIVVALDLGV 237

Query: 176 KVFRDFSRPNVGVDETAFMTVGVWGGELCLLYSHHFDIDIEIWVMKNYGQSESWIKLFA 352
           + +R+  +P    D+  ++ +GV  G LC L ++     +++W+MK YG  ESW KLF+
Sbjct: 238 EDYREVLQPEYK-DKNFYIDLGVLRGCLCFL-ANFLGERVDVWMMKEYGVKESWTKLFS 294


>ref|XP_003611186.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355512521|gb|AES94144.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 375

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 42/124 (33%), Positives = 71/124 (57%), Gaps = 3/124 (2%)
 Frame = +2

Query: 2   EVAVYSVNHASCTTVISNIPYQLLRRKESWVFLNGALHWLG-YAKD--NFSKTIVSLNVG 172
           EV+VY++        I + P  ++   +  +F++G ++WL  Y  D  N   TIVSL++ 
Sbjct: 189 EVSVYTLG-TDYWRRIEDFPSLMIPYSQQGIFVSGTVNWLADYDLDDNNSLGTIVSLDLR 247

Query: 173 DKVFRDFSRPNVGVDETAFMTVGVWGGELCLLYSHHFDIDIEIWVMKNYGQSESWIKLFA 352
            +++++ S+P+ G D T  +++G     LC+ +SH    D ++W+MK YG  ESWIKL  
Sbjct: 248 KEIYQEISQPDYG-DVTVKLSLGAMRECLCV-FSHSDSFD-DVWLMKEYGNEESWIKLIR 304

Query: 353 FPKI 364
            P I
Sbjct: 305 IPCI 308


>ref|XP_003621455.1| F-box protein [Medicago truncatula] gi|355496470|gb|AES77673.1|
           F-box protein [Medicago truncatula]
          Length = 404

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 38/108 (35%), Positives = 65/108 (60%), Gaps = 4/108 (3%)
 Frame = +2

Query: 47  ISNIPYQLLRRKESWV--FLNGALHWLGYAKDNF-SKTIVSLNVGDKVFRDFSRPNVGVD 217
           I N P  ++     +V  F++G ++W    + N+ S  I+SL++G++ +++ SRP+ G+D
Sbjct: 220 IPNFPSNIMGLPNGYVGKFVSGTINWAIENQKNYDSWVILSLDLGNESYQEISRPDFGLD 279

Query: 218 ETAFM-TVGVWGGELCLLYSHHFDIDIEIWVMKNYGQSESWIKLFAFP 358
           +   + T+GV    LC+L   + +  + IWVMK+YG   SW KLFA P
Sbjct: 280 DPVHIFTLGVSKDCLCVLV--YTETLLGIWVMKDYGNKNSWTKLFAVP 325