BLASTX nr result

ID: Coptis25_contig00043063 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043063
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299084.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06

>ref|XP_002299084.1| predicted protein [Populus trichocarpa] gi|222846342|gb|EEE83889.1|
           predicted protein [Populus trichocarpa]
          Length = 949

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
 Frame = +2

Query: 26  NKIQSLPVLVKM-DLPKLLWTKKGIEFVGSILGDPICMDDATSKRERLSYARACVVVDTD 202
           N I  +PV +++ DLP  LWTK+G+  V S++G P+  D+ T   +RL YAR CV VD  
Sbjct: 29  NMITKIPVWIRIYDLPFPLWTKEGLSEVASMVGQPLSCDELTLGCKRLDYARLCVEVDAS 88

Query: 203 FSFRSSTRLDLGKGVQ 250
             F    +L+    ++
Sbjct: 89  LPFVHKFKLEFSTTIR 104


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