BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043036
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD63139.1| Reverse transcriptase family protein [Asparagus o...    77   1e-12
gb|AAK92670.1|AC090714_3 putative gag-pol precursor [Oryza sativ...    76   3e-12
gb|ABF97101.1| retrotransposon protein, putative, unclassified [...    76   3e-12
dbj|BAB08213.2| unnamed protein product [Oryza sativa Japonica G...    75   4e-12
gb|ABD63162.1| RNase H family protein [Asparagus officinalis]          75   6e-12

>gb|ABD63139.1| Reverse transcriptase family protein [Asparagus officinalis]
          Length = 1181

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 39/122 (31%), Positives = 70/122 (57%), Gaps = 6/122 (4%)
 Frame = -3

Query: 348 SDMHGNTILSNSQEVIQAQSAPQINCSTIS-----SSEGPPTIDRLLEVQIGNLGG-QTT 187
           S  H +      +E+I+    P I    I          PPT D+++++ +G+    +  
Sbjct: 571 STSHPDEDAGGDEELIEFTDDPWIKRLNILWDMCFEQREPPTEDKVIQINMGDESNPKPI 630

Query: 186 FISAELTENEQKEMVALLRKNKKIFAWSVEQMPGISSEVACHTLDIDPTIKPVRQKPRRM 7
           FI+ +L+ +E++ +++L+R+   +FAW+ E MPG+  +VA H L+IDP +KPV+Q+ RR 
Sbjct: 631 FIAEDLSSSEKENLISLIREYIDVFAWNYEDMPGLDPKVAMHRLNIDPDVKPVKQQQRRF 690

Query: 6   AP 1
            P
Sbjct: 691 RP 692


>gb|AAK92670.1|AC090714_3 putative gag-pol precursor [Oryza sativa Japonica Group]
          Length = 1262

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 36/85 (42%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
 Frame = -3

Query: 252 EGPPTIDRLLEVQIGNLGG-QTTFISAELTENEQKEMVALLRKNKKIFAWSVEQMPGISS 76
           E  PTID L+E+ +G +   + TF+SA L+  EQ+   + L + +  FAW+ ++MPG+  
Sbjct: 280 EKQPTIDDLVEINLGTMDDPRPTFVSAALSAEEQESYRSFLMEYRDCFAWTYKEMPGLDP 339

Query: 75  EVACHTLDIDPTIKPVRQKPRRMAP 1
            VA H L IDP  +PV+Q PRR+ P
Sbjct: 340 RVATHKLAIDPQFRPVKQPPRRLRP 364


>gb|ABF97101.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1269

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 36/85 (42%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
 Frame = -3

Query: 252 EGPPTIDRLLEVQIGNLGG-QTTFISAELTENEQKEMVALLRKNKKIFAWSVEQMPGISS 76
           E  PTID L+E+ +G +   + TF+SA L+  EQ+   + L + +  FAW+ ++MPG+  
Sbjct: 280 EKQPTIDDLVEINLGTMDDPRPTFVSAALSAEEQESYRSFLMEYRDCFAWTYKEMPGLDP 339

Query: 75  EVACHTLDIDPTIKPVRQKPRRMAP 1
            VA H L IDP  +PV+Q PRR+ P
Sbjct: 340 RVATHKLAIDPQFRPVKQPPRRLRP 364


>dbj|BAB08213.2| unnamed protein product [Oryza sativa Japonica Group]
          Length = 2876

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 36/84 (42%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
 Frame = -3

Query: 249  GPPTIDRLLEVQIGNLGG-QTTFISAELTENEQKEMVALLRKNKKIFAWSVEQMPGISSE 73
            G PTID L+E+ +G     +  F+S  LTE E+++  + L + +  FAW+ ++MPG+ S 
Sbjct: 1771 GQPTIDELVEMNLGTEDDPRPIFVSGMLTEEEREDYRSFLMEFRDCFAWTYKEMPGLDSR 1830

Query: 72   VACHTLDIDPTIKPVRQKPRRMAP 1
            VA H L IDP  +PV+Q PRR+ P
Sbjct: 1831 VATHKLAIDPQFRPVKQPPRRLRP 1854


>gb|ABD63162.1| RNase H family protein [Asparagus officinalis]
          Length = 1189

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 39/122 (31%), Positives = 73/122 (59%), Gaps = 6/122 (4%)
 Frame = -3

Query: 348 SDMHGNTILSNSQEVIQAQSAPQINCSTIS-----SSEGPPTIDRLLEVQIGNLGG-QTT 187
           S  H +    + +E++++ + P I    I          PPT D++++V +G+    +  
Sbjct: 67  STSHLDEDAGDDEELMESTNDPWIKRLNILWDMRFEQREPPTEDKVIQVNMGDEHDPKPI 126

Query: 186 FISAELTENEQKEMVALLRKNKKIFAWSVEQMPGISSEVACHTLDIDPTIKPVRQKPRRM 7
           FI+ +L+ +E++++++L+R+   +FAW+ E MPG+  +VA H L+IDP  KPV+Q+ RR 
Sbjct: 127 FIAEDLSSSEKEDLISLIREYIDVFAWNYEDMPGLDPKVAMHHLNIDPDAKPVKQQQRRF 186

Query: 6   AP 1
            P
Sbjct: 187 RP 188