BLASTX nr result

ID: Coptis25_contig00043026 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043026
         (590 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003637076.1| hypothetical protein MTR_070s0002 [Medicago ...   296   2e-78
ref|XP_003591683.1| hypothetical protein MTR_1g090540 [Medicago ...   296   2e-78
ref|XP_003535478.1| PREDICTED: uncharacterized protein LOC100818...   296   2e-78
ref|XP_002311937.1| predicted protein [Populus trichocarpa] gi|2...   294   9e-78
emb|CAN61336.1| hypothetical protein VITISV_042240 [Vitis vinifera]   287   1e-75

>ref|XP_003637076.1| hypothetical protein MTR_070s0002 [Medicago truncatula]
           gi|355503011|gb|AES84214.1| hypothetical protein
           MTR_070s0002 [Medicago truncatula]
          Length = 501

 Score =  296 bits (758), Expect = 2e-78
 Identities = 143/196 (72%), Positives = 162/196 (82%)
 Frame = +1

Query: 1   GRTMFETDKVNENHVKRCNRMDSVWVPTDFHVSTFIQSGVVPSKIAKIVQPVDVNFFDPS 180
           GRTMFETD+VN  HV+RCNRMD VWVPTDFH +TFI+SGV  SK+ KIVQP+DV FFDP 
Sbjct: 185 GRTMFETDRVNVEHVERCNRMDYVWVPTDFHKATFIESGVNASKVVKIVQPIDVKFFDPD 244

Query: 181 KYKALDIGSRAXXXXXXXXXXXXQKERKFVFLSIFKWEYRKGWDVLLKSYLKEFSKSDRV 360
           KYKALD+ S              + +  FVFLSIFKWEYRKGWDVLLKSYLKEFSK D V
Sbjct: 245 KYKALDLDSTGKLILGS------EVKTGFVFLSIFKWEYRKGWDVLLKSYLKEFSKDDSV 298

Query: 361 ALHLLTNPYHSDSNFGSKILDFVKDSLFEEPVNGWAPVYVIDTHIAQVDLPRIYKAADAF 540
            L+LLTNPYH++ +FG+KILDFV++S FEEPV+GWA VYVIDTHIAQ +LPR+YKAADAF
Sbjct: 299 VLYLLTNPYHTERDFGNKILDFVENSGFEEPVSGWASVYVIDTHIAQSELPRVYKAADAF 358

Query: 541 VLPSRGEGWGRPLVEA 588
           VLPSRGEGWGRPLVEA
Sbjct: 359 VLPSRGEGWGRPLVEA 374


>ref|XP_003591683.1| hypothetical protein MTR_1g090540 [Medicago truncatula]
           gi|355480731|gb|AES61934.1| hypothetical protein
           MTR_1g090540 [Medicago truncatula]
          Length = 475

 Score =  296 bits (758), Expect = 2e-78
 Identities = 143/196 (72%), Positives = 162/196 (82%)
 Frame = +1

Query: 1   GRTMFETDKVNENHVKRCNRMDSVWVPTDFHVSTFIQSGVVPSKIAKIVQPVDVNFFDPS 180
           GRTMFETD+VN  HV+RCNRMD VWVPTDFH +TFI+SGV  SK+ KIVQP+DV FFDP 
Sbjct: 185 GRTMFETDRVNVEHVERCNRMDYVWVPTDFHKATFIESGVNASKVVKIVQPIDVKFFDPD 244

Query: 181 KYKALDIGSRAXXXXXXXXXXXXQKERKFVFLSIFKWEYRKGWDVLLKSYLKEFSKSDRV 360
           KYKALD+ S              + +  FVFLSIFKWEYRKGWDVLLKSYLKEFSK D V
Sbjct: 245 KYKALDLDSTGKLILGS------EVKTGFVFLSIFKWEYRKGWDVLLKSYLKEFSKDDSV 298

Query: 361 ALHLLTNPYHSDSNFGSKILDFVKDSLFEEPVNGWAPVYVIDTHIAQVDLPRIYKAADAF 540
            L+LLTNPYH++ +FG+KILDFV++S FEEPV+GWA VYVIDTHIAQ +LPR+YKAADAF
Sbjct: 299 VLYLLTNPYHTERDFGNKILDFVENSGFEEPVSGWASVYVIDTHIAQSELPRVYKAADAF 358

Query: 541 VLPSRGEGWGRPLVEA 588
           VLPSRGEGWGRPLVEA
Sbjct: 359 VLPSRGEGWGRPLVEA 374


>ref|XP_003535478.1| PREDICTED: uncharacterized protein LOC100818182 [Glycine max]
          Length = 484

 Score =  296 bits (757), Expect = 2e-78
 Identities = 141/196 (71%), Positives = 161/196 (82%)
 Frame = +1

Query: 1   GRTMFETDKVNENHVKRCNRMDSVWVPTDFHVSTFIQSGVVPSKIAKIVQPVDVNFFDPS 180
           GRTMFETD+VN+ HV+RCNRMD VWVPT+FH STF+QSGV PSK+ KIVQPVDV FFDP 
Sbjct: 194 GRTMFETDRVNDEHVERCNRMDYVWVPTEFHKSTFVQSGVHPSKVVKIVQPVDVEFFDPV 253

Query: 181 KYKALDIGSRAXXXXXXXXXXXXQKERKFVFLSIFKWEYRKGWDVLLKSYLKEFSKSDRV 360
           +YK LD+ SRA               + FVFLS+FKWEYRKGWDVLLKSYLKEFS+ DRV
Sbjct: 254 RYKPLDLASRAKLVLGSGV------RKSFVFLSVFKWEYRKGWDVLLKSYLKEFSQDDRV 307

Query: 361 ALHLLTNPYHSDSNFGSKILDFVKDSLFEEPVNGWAPVYVIDTHIAQVDLPRIYKAADAF 540
           AL+LLTNPYH+D +FG+KILDFV+ S   EPV+GWA VYVIDTHIA  + PR+Y+AADAF
Sbjct: 308 ALYLLTNPYHTDRDFGNKILDFVESSDMVEPVSGWASVYVIDTHIASREFPRVYRAADAF 367

Query: 541 VLPSRGEGWGRPLVEA 588
           VLPSRGEGWGRPLVEA
Sbjct: 368 VLPSRGEGWGRPLVEA 383


>ref|XP_002311937.1| predicted protein [Populus trichocarpa] gi|222851757|gb|EEE89304.1|
           predicted protein [Populus trichocarpa]
          Length = 401

 Score =  294 bits (752), Expect = 9e-78
 Identities = 142/196 (72%), Positives = 161/196 (82%)
 Frame = +1

Query: 1   GRTMFETDKVNENHVKRCNRMDSVWVPTDFHVSTFIQSGVVPSKIAKIVQPVDVNFFDPS 180
           GRTMFETD+VN  HVKRCNRMD VWVPTDFHVSTF+QSGV PSK+ K+VQ VDV FFDP 
Sbjct: 104 GRTMFETDRVNAEHVKRCNRMDYVWVPTDFHVSTFVQSGVDPSKVVKVVQAVDVEFFDPL 163

Query: 181 KYKALDIGSRAXXXXXXXXXXXXQKERKFVFLSIFKWEYRKGWDVLLKSYLKEFSKSDRV 360
           KY+ LD+ S               K  +FVFLS+FKWEYRKGWDVLLK+YLKEFS+ D V
Sbjct: 164 KYEPLDLVSIGNLVLGSGKKDLDSK-MEFVFLSVFKWEYRKGWDVLLKAYLKEFSRIDGV 222

Query: 361 ALHLLTNPYHSDSNFGSKILDFVKDSLFEEPVNGWAPVYVIDTHIAQVDLPRIYKAADAF 540
           AL+LLTNPYHSD +FG+KI++FV+D+  EEPV GWA +YVIDTHIAQVDLPR+YKAA AF
Sbjct: 223 ALYLLTNPYHSDRDFGNKIVEFVEDTGIEEPVKGWALIYVIDTHIAQVDLPRMYKAAHAF 282

Query: 541 VLPSRGEGWGRPLVEA 588
           VLPSRGEGWGRPLVEA
Sbjct: 283 VLPSRGEGWGRPLVEA 298


>emb|CAN61336.1| hypothetical protein VITISV_042240 [Vitis vinifera]
          Length = 395

 Score =  287 bits (734), Expect = 1e-75
 Identities = 134/196 (68%), Positives = 160/196 (81%)
 Frame = +1

Query: 1   GRTMFETDKVNENHVKRCNRMDSVWVPTDFHVSTFIQSGVVPSKIAKIVQPVDVNFFDPS 180
           GRTMFETD++N  HV+RCN+MD VWVPT+FHVSTF++SGV PSK+ KIVQP+DV+FFDP 
Sbjct: 104 GRTMFETDRLNSEHVRRCNQMDFVWVPTEFHVSTFVKSGVEPSKVVKIVQPIDVSFFDPL 163

Query: 181 KYKALDIGSRAXXXXXXXXXXXXQKERKFVFLSIFKWEYRKGWDVLLKSYLKEFSKSDRV 360
           K+K  D+GS              +   +FV LS+FKWEYRKGWDVLL++YLKEFS  D V
Sbjct: 164 KHKPFDLGS-----IGKLVLGRAKMPEEFVLLSVFKWEYRKGWDVLLRAYLKEFSMIDGV 218

Query: 361 ALHLLTNPYHSDSNFGSKILDFVKDSLFEEPVNGWAPVYVIDTHIAQVDLPRIYKAADAF 540
           AL+LLTNPYHSD +FG+KI++FV+D   E+P N WAP+YVIDTHIAQVDLPR+Y AADAF
Sbjct: 219 ALYLLTNPYHSDGDFGNKIVEFVEDCGIEKPPNTWAPIYVIDTHIAQVDLPRVYAAADAF 278

Query: 541 VLPSRGEGWGRPLVEA 588
           VLPSRGEGWGRPLVEA
Sbjct: 279 VLPSRGEGWGRPLVEA 294


Top