BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043025
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEP33757.1| organelle transcript processing 82, partial [Aeth...    95   7e-18
ref|XP_002328557.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17
ref|XP_004143391.1| PREDICTED: putative pentatricopeptide repeat...    92   3e-17
emb|CBI22140.3| unnamed protein product [Vitis vinifera]               92   6e-17
emb|CBI30347.3| unnamed protein product [Vitis vinifera]               91   1e-16

>gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
           cordifolium]
          Length = 679

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 45/103 (43%), Positives = 71/103 (68%), Gaps = 1/103 (0%)
 Frame = -1

Query: 309 VHAQSIVFGIPDSDVHVYTSLLNMYAL-GNVEIARKVFDRMKYKTAATWNSMIVAYTSRG 133
           +HAQ + +G+   D+HV+TSL++MYA  G VE A KVFD   ++   ++ +MI  Y SRG
Sbjct: 100 IHAQILKYGLT-VDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRG 158

Query: 132 GIEAAKELFDEMPDKNEKSWNVMVCGYTKIGKFDVARSMFNDM 4
            ++ A+++FDE+P K+  SWN M+ GY +IG++  A  +FN+M
Sbjct: 159 NMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEM 201


>ref|XP_002328557.1| predicted protein [Populus trichocarpa] gi|222838272|gb|EEE76637.1|
           predicted protein [Populus trichocarpa]
          Length = 643

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 48/104 (46%), Positives = 68/104 (65%), Gaps = 1/104 (0%)
 Frame = -1

Query: 309 VHAQSIVFGIPDSDVHVYTSLLNMYA-LGNVEIARKVFDRMKYKTAATWNSMIVAYTSRG 133
           +H Q++V G+ D+ + V T+L++MY   G V  ARKVFD M    A  WN+M+ A    G
Sbjct: 128 LHCQALVHGL-DTHLFVGTTLISMYGECGFVGFARKVFDEMPEPNAIAWNAMVTACCRGG 186

Query: 132 GIEAAKELFDEMPDKNEKSWNVMVCGYTKIGKFDVARSMFNDMP 1
            ++  +ELFD MP +N  SWNVM+ GYTK G+ ++AR MF +MP
Sbjct: 187 DMKGGRELFDLMPVRNLMSWNVMLAGYTKAGELELAREMFLEMP 230


>ref|XP_004143391.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g37570-like [Cucumis sativus]
           gi|449519310|ref|XP_004166678.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At5g37570-like [Cucumis sativus]
          Length = 565

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 45/105 (42%), Positives = 66/105 (62%), Gaps = 1/105 (0%)
 Frame = -1

Query: 312 AVHAQSIVFGIPDSDVHVYTSLLNMYALGN-VEIARKVFDRMKYKTAATWNSMIVAYTSR 136
           A+H   +  G+ D D++V TSL+N+Y  G  ++ ARKVFD M  +   +W +MIV Y+S 
Sbjct: 148 ALHGSILRCGV-DEDIYVTTSLVNLYGKGGLIDCARKVFDGMSERNVVSWTAMIVGYSSI 206

Query: 135 GGIEAAKELFDEMPDKNEKSWNVMVCGYTKIGKFDVARSMFNDMP 1
           G +  AK LFD MP++N  SWN ++ GY K+G    A   F++MP
Sbjct: 207 GNLVEAKRLFDLMPERNVASWNAIIGGYMKMGDVKSAEKAFDEMP 251


>emb|CBI22140.3| unnamed protein product [Vitis vinifera]
          Length = 428

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 44/107 (41%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
 Frame = -1

Query: 312 AVHAQSIVFGIP--DSDVHVYTSLLNMYA-LGNVEIARKVFDRMKYKTAATWNSMIVAYT 142
           ++H Q   FG       ++V T+L++ Y  LG++EIARK+FD M  +   +WNSM+  Y 
Sbjct: 5   SIHGQVQKFGFSCGGDGIYVETALVDFYCKLGDMEIARKMFDEMAERNVVSWNSMLAGYL 64

Query: 141 SRGGIEAAKELFDEMPDKNEKSWNVMVCGYTKIGKFDVARSMFNDMP 1
             G +E A  LF +MP++N  SWN M+ G+ + G  D ARS F+ MP
Sbjct: 65  KAGDMEKASSLFQQMPERNFASWNAMISGHVEFGDIDSARSFFDAMP 111



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 28/101 (27%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
 Frame = -1

Query: 303 AQSIVFGIPDSDVHVYTSLLNMYA-LGNVEIARKVFDRMKYKTAATWNSMIVAYTSRGGI 127
           A S+   +P+ +   + ++++ +   G+++ AR  FD M  K   +W +MI  Y+  G +
Sbjct: 72  ASSLFQQMPERNFASWNAMISGHVEFGDIDSARSFFDAMPQKNNVSWMTMISGYSKCGDV 131

Query: 126 EAAKELFDEMPDKNEKSWNVMVCGYTKIGKFDVARSMFNDM 4
           ++A ELFD++  K+   +N M+  Y +  + + A ++FN+M
Sbjct: 132 DSACELFDQVGGKDLLLFNAMIACYAQNSRPNEALNLFNNM 172


>emb|CBI30347.3| unnamed protein product [Vitis vinifera]
          Length = 560

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 45/105 (42%), Positives = 63/105 (60%), Gaps = 1/105 (0%)
 Frame = -1

Query: 312 AVHAQSIVFGIPDSDVHVYTSLLNMYA-LGNVEIARKVFDRMKYKTAATWNSMIVAYTSR 136
           A H  ++  G+   DV V TSL+++Y   G +  ARKVFD M  +   +W +MI  Y S 
Sbjct: 192 AFHGSAVRCGV-GGDVFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYASF 250

Query: 135 GGIEAAKELFDEMPDKNEKSWNVMVCGYTKIGKFDVARSMFNDMP 1
             +  A++LFDEMP+KN  SWN ++ GY K G    AR MF++MP
Sbjct: 251 SDLVEARKLFDEMPEKNAVSWNAIISGYVKCGDLRSARKMFDEMP 295



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 29/93 (31%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
 Frame = -1

Query: 303 AQSIVFGIPDSDVHVYTSLLNMYA-LGNVEIARKVFDRMKYKTAATWNSMIVAYTSRGGI 127
           A+ +   + + +V  +T+++  YA   ++  ARK+FD M  K A +WN++I  Y   G +
Sbjct: 225 ARKVFDEMGERNVVSWTAMIAGYASFSDLVEARKLFDEMPEKNAVSWNAIISGYVKCGDL 284

Query: 126 EAAKELFDEMPDKNEK--SWNVMVCGYTKIGKF 34
            +A+++FDEMP +N    +W+ ++ G  K  +F
Sbjct: 285 RSARKMFDEMPHRNRDVVAWSALISGNVKPDEF 317