BLASTX nr result
ID: Coptis25_contig00043025
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00043025 (315 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AEP33757.1| organelle transcript processing 82, partial [Aeth... 95 7e-18 ref|XP_002328557.1| predicted protein [Populus trichocarpa] gi|2... 94 1e-17 ref|XP_004143391.1| PREDICTED: putative pentatricopeptide repeat... 92 3e-17 emb|CBI22140.3| unnamed protein product [Vitis vinifera] 92 6e-17 emb|CBI30347.3| unnamed protein product [Vitis vinifera] 91 1e-16 >gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema cordifolium] Length = 679 Score = 94.7 bits (234), Expect = 7e-18 Identities = 45/103 (43%), Positives = 71/103 (68%), Gaps = 1/103 (0%) Frame = -1 Query: 309 VHAQSIVFGIPDSDVHVYTSLLNMYAL-GNVEIARKVFDRMKYKTAATWNSMIVAYTSRG 133 +HAQ + +G+ D+HV+TSL++MYA G VE A KVFD ++ ++ +MI Y SRG Sbjct: 100 IHAQILKYGLT-VDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRG 158 Query: 132 GIEAAKELFDEMPDKNEKSWNVMVCGYTKIGKFDVARSMFNDM 4 ++ A+++FDE+P K+ SWN M+ GY +IG++ A +FN+M Sbjct: 159 NMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEM 201 >ref|XP_002328557.1| predicted protein [Populus trichocarpa] gi|222838272|gb|EEE76637.1| predicted protein [Populus trichocarpa] Length = 643 Score = 94.0 bits (232), Expect = 1e-17 Identities = 48/104 (46%), Positives = 68/104 (65%), Gaps = 1/104 (0%) Frame = -1 Query: 309 VHAQSIVFGIPDSDVHVYTSLLNMYA-LGNVEIARKVFDRMKYKTAATWNSMIVAYTSRG 133 +H Q++V G+ D+ + V T+L++MY G V ARKVFD M A WN+M+ A G Sbjct: 128 LHCQALVHGL-DTHLFVGTTLISMYGECGFVGFARKVFDEMPEPNAIAWNAMVTACCRGG 186 Query: 132 GIEAAKELFDEMPDKNEKSWNVMVCGYTKIGKFDVARSMFNDMP 1 ++ +ELFD MP +N SWNVM+ GYTK G+ ++AR MF +MP Sbjct: 187 DMKGGRELFDLMPVRNLMSWNVMLAGYTKAGELELAREMFLEMP 230 >ref|XP_004143391.1| PREDICTED: putative pentatricopeptide repeat-containing protein At5g37570-like [Cucumis sativus] gi|449519310|ref|XP_004166678.1| PREDICTED: putative pentatricopeptide repeat-containing protein At5g37570-like [Cucumis sativus] Length = 565 Score = 92.4 bits (228), Expect = 3e-17 Identities = 45/105 (42%), Positives = 66/105 (62%), Gaps = 1/105 (0%) Frame = -1 Query: 312 AVHAQSIVFGIPDSDVHVYTSLLNMYALGN-VEIARKVFDRMKYKTAATWNSMIVAYTSR 136 A+H + G+ D D++V TSL+N+Y G ++ ARKVFD M + +W +MIV Y+S Sbjct: 148 ALHGSILRCGV-DEDIYVTTSLVNLYGKGGLIDCARKVFDGMSERNVVSWTAMIVGYSSI 206 Query: 135 GGIEAAKELFDEMPDKNEKSWNVMVCGYTKIGKFDVARSMFNDMP 1 G + AK LFD MP++N SWN ++ GY K+G A F++MP Sbjct: 207 GNLVEAKRLFDLMPERNVASWNAIIGGYMKMGDVKSAEKAFDEMP 251 >emb|CBI22140.3| unnamed protein product [Vitis vinifera] Length = 428 Score = 91.7 bits (226), Expect = 6e-17 Identities = 44/107 (41%), Positives = 65/107 (60%), Gaps = 3/107 (2%) Frame = -1 Query: 312 AVHAQSIVFGIP--DSDVHVYTSLLNMYA-LGNVEIARKVFDRMKYKTAATWNSMIVAYT 142 ++H Q FG ++V T+L++ Y LG++EIARK+FD M + +WNSM+ Y Sbjct: 5 SIHGQVQKFGFSCGGDGIYVETALVDFYCKLGDMEIARKMFDEMAERNVVSWNSMLAGYL 64 Query: 141 SRGGIEAAKELFDEMPDKNEKSWNVMVCGYTKIGKFDVARSMFNDMP 1 G +E A LF +MP++N SWN M+ G+ + G D ARS F+ MP Sbjct: 65 KAGDMEKASSLFQQMPERNFASWNAMISGHVEFGDIDSARSFFDAMP 111 Score = 55.1 bits (131), Expect = 6e-06 Identities = 28/101 (27%), Positives = 58/101 (57%), Gaps = 1/101 (0%) Frame = -1 Query: 303 AQSIVFGIPDSDVHVYTSLLNMYA-LGNVEIARKVFDRMKYKTAATWNSMIVAYTSRGGI 127 A S+ +P+ + + ++++ + G+++ AR FD M K +W +MI Y+ G + Sbjct: 72 ASSLFQQMPERNFASWNAMISGHVEFGDIDSARSFFDAMPQKNNVSWMTMISGYSKCGDV 131 Query: 126 EAAKELFDEMPDKNEKSWNVMVCGYTKIGKFDVARSMFNDM 4 ++A ELFD++ K+ +N M+ Y + + + A ++FN+M Sbjct: 132 DSACELFDQVGGKDLLLFNAMIACYAQNSRPNEALNLFNNM 172 >emb|CBI30347.3| unnamed protein product [Vitis vinifera] Length = 560 Score = 90.5 bits (223), Expect = 1e-16 Identities = 45/105 (42%), Positives = 63/105 (60%), Gaps = 1/105 (0%) Frame = -1 Query: 312 AVHAQSIVFGIPDSDVHVYTSLLNMYA-LGNVEIARKVFDRMKYKTAATWNSMIVAYTSR 136 A H ++ G+ DV V TSL+++Y G + ARKVFD M + +W +MI Y S Sbjct: 192 AFHGSAVRCGV-GGDVFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYASF 250 Query: 135 GGIEAAKELFDEMPDKNEKSWNVMVCGYTKIGKFDVARSMFNDMP 1 + A++LFDEMP+KN SWN ++ GY K G AR MF++MP Sbjct: 251 SDLVEARKLFDEMPEKNAVSWNAIISGYVKCGDLRSARKMFDEMP 295 Score = 57.4 bits (137), Expect = 1e-06 Identities = 29/93 (31%), Positives = 55/93 (59%), Gaps = 3/93 (3%) Frame = -1 Query: 303 AQSIVFGIPDSDVHVYTSLLNMYA-LGNVEIARKVFDRMKYKTAATWNSMIVAYTSRGGI 127 A+ + + + +V +T+++ YA ++ ARK+FD M K A +WN++I Y G + Sbjct: 225 ARKVFDEMGERNVVSWTAMIAGYASFSDLVEARKLFDEMPEKNAVSWNAIISGYVKCGDL 284 Query: 126 EAAKELFDEMPDKNEK--SWNVMVCGYTKIGKF 34 +A+++FDEMP +N +W+ ++ G K +F Sbjct: 285 RSARKMFDEMPHRNRDVVAWSALISGNVKPDEF 317