BLASTX nr result
ID: Coptis25_contig00043014
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00043014 (308 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis] 154 9e-36 gb|ABD63145.1| F7F22.17, putative [Asparagus officinalis] 154 9e-36 ref|XP_003525980.1| PREDICTED: uncharacterized protein LOC100792... 148 5e-34 gb|ABG37658.1| integrase [Populus trichocarpa] 148 5e-34 dbj|BAB02630.1| retroelement pol polyprotein-like [Arabidopsis t... 145 3e-33 >gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis] Length = 1788 Score = 154 bits (388), Expect = 9e-36 Identities = 73/102 (71%), Positives = 88/102 (86%) Frame = -1 Query: 308 LVLNWEKCHFMVKKGIVLGHIVSSDGIEVDKAKLDKMASLPIPRTVREIRAFLGHAGFYR 129 L LNWEKCHFMVK+GIVLGH+VS+ GIEVDKAK+D +++LP P+TV+++R+FLGHAGFYR Sbjct: 1034 LTLNWEKCHFMVKQGIVLGHVVSNRGIEVDKAKVDIISNLPPPKTVKDVRSFLGHAGFYR 1093 Query: 128 RFIKDFSKIARPLTNLLLKDAIFDFNYNCKHAFETLKAALTS 3 RFIKDFSKIARPLTNLL KD F F+ +C AFE LK LT+ Sbjct: 1094 RFIKDFSKIARPLTNLLAKDTSFVFSPDCLKAFEYLKKELTT 1135 >gb|ABD63145.1| F7F22.17, putative [Asparagus officinalis] Length = 680 Score = 154 bits (388), Expect = 9e-36 Identities = 73/102 (71%), Positives = 88/102 (86%) Frame = -1 Query: 308 LVLNWEKCHFMVKKGIVLGHIVSSDGIEVDKAKLDKMASLPIPRTVREIRAFLGHAGFYR 129 L LNWEKCHFMVK+GIVLGH+VS+ GIEVDKAK+D +++LP P+TV+++R+FLGHAGFYR Sbjct: 339 LTLNWEKCHFMVKQGIVLGHVVSNRGIEVDKAKVDIISNLPPPKTVKDVRSFLGHAGFYR 398 Query: 128 RFIKDFSKIARPLTNLLLKDAIFDFNYNCKHAFETLKAALTS 3 RFIKDFSKIARPLTNLL KD F F+ +C AFE LK LT+ Sbjct: 399 RFIKDFSKIARPLTNLLAKDTSFVFSPDCLKAFEYLKKELTT 440 >ref|XP_003525980.1| PREDICTED: uncharacterized protein LOC100792198 [Glycine max] Length = 920 Score = 148 bits (373), Expect = 5e-34 Identities = 70/102 (68%), Positives = 85/102 (83%) Frame = -1 Query: 308 LVLNWEKCHFMVKKGIVLGHIVSSDGIEVDKAKLDKMASLPIPRTVREIRAFLGHAGFYR 129 LVLN+EKCHFMV++GIVLGHI+S+ GIEVD AK+ ++ LP P VRE+R+FLGHAGFYR Sbjct: 274 LVLNFEKCHFMVEQGIVLGHIISNKGIEVDPAKISVISQLPYPSCVREVRSFLGHAGFYR 333 Query: 128 RFIKDFSKIARPLTNLLLKDAIFDFNYNCKHAFETLKAALTS 3 RFI+DFSK+A PL+NLL K+ FDFN CK AF+ LK ALTS Sbjct: 334 RFIRDFSKVALPLSNLLQKEVEFDFNDRCKEAFDCLKRALTS 375 >gb|ABG37658.1| integrase [Populus trichocarpa] Length = 1139 Score = 148 bits (373), Expect = 5e-34 Identities = 69/102 (67%), Positives = 87/102 (85%) Frame = -1 Query: 308 LVLNWEKCHFMVKKGIVLGHIVSSDGIEVDKAKLDKMASLPIPRTVREIRAFLGHAGFYR 129 LVLNWEKCHFMV GIVLGHIVSS GIEVDK+K++ +A+LP P++V+++R+FLGHAGFYR Sbjct: 527 LVLNWEKCHFMVTNGIVLGHIVSSKGIEVDKSKIELIANLPTPKSVKDVRSFLGHAGFYR 586 Query: 128 RFIKDFSKIARPLTNLLLKDAIFDFNYNCKHAFETLKAALTS 3 RFIKDFS I++PL+NLL KD IF++ +C+ AF LK LTS Sbjct: 587 RFIKDFSVISKPLSNLLTKDNIFEWTEHCEEAFVKLKNLLTS 628 >dbj|BAB02630.1| retroelement pol polyprotein-like [Arabidopsis thaliana] Length = 897 Score = 145 bits (367), Expect = 3e-33 Identities = 69/102 (67%), Positives = 83/102 (81%) Frame = -1 Query: 308 LVLNWEKCHFMVKKGIVLGHIVSSDGIEVDKAKLDKMASLPIPRTVREIRAFLGHAGFYR 129 LVLNWEKCHFMVK+GIVLGH +S GIEVDK K++ M L P+TV+EIR+FLGHAGFYR Sbjct: 242 LVLNWEKCHFMVKEGIVLGHKISEKGIEVDKGKVEVMMQLQPPKTVKEIRSFLGHAGFYR 301 Query: 128 RFIKDFSKIARPLTNLLLKDAIFDFNYNCKHAFETLKAALTS 3 RFIKDFSKI RPLT LL K+ F+F+ +C +F+T+K AL S Sbjct: 302 RFIKDFSKIVRPLTRLLCKETEFEFDEDCLKSFQTIKDALVS 343