BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043014
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]    154   9e-36
gb|ABD63145.1| F7F22.17, putative [Asparagus officinalis]             154   9e-36
ref|XP_003525980.1| PREDICTED: uncharacterized protein LOC100792...   148   5e-34
gb|ABG37658.1| integrase [Populus trichocarpa]                        148   5e-34
dbj|BAB02630.1| retroelement pol polyprotein-like [Arabidopsis t...   145   3e-33

>gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 1788

 Score =  154 bits (388), Expect = 9e-36
 Identities = 73/102 (71%), Positives = 88/102 (86%)
 Frame = -1

Query: 308  LVLNWEKCHFMVKKGIVLGHIVSSDGIEVDKAKLDKMASLPIPRTVREIRAFLGHAGFYR 129
            L LNWEKCHFMVK+GIVLGH+VS+ GIEVDKAK+D +++LP P+TV+++R+FLGHAGFYR
Sbjct: 1034 LTLNWEKCHFMVKQGIVLGHVVSNRGIEVDKAKVDIISNLPPPKTVKDVRSFLGHAGFYR 1093

Query: 128  RFIKDFSKIARPLTNLLLKDAIFDFNYNCKHAFETLKAALTS 3
            RFIKDFSKIARPLTNLL KD  F F+ +C  AFE LK  LT+
Sbjct: 1094 RFIKDFSKIARPLTNLLAKDTSFVFSPDCLKAFEYLKKELTT 1135


>gb|ABD63145.1| F7F22.17, putative [Asparagus officinalis]
          Length = 680

 Score =  154 bits (388), Expect = 9e-36
 Identities = 73/102 (71%), Positives = 88/102 (86%)
 Frame = -1

Query: 308 LVLNWEKCHFMVKKGIVLGHIVSSDGIEVDKAKLDKMASLPIPRTVREIRAFLGHAGFYR 129
           L LNWEKCHFMVK+GIVLGH+VS+ GIEVDKAK+D +++LP P+TV+++R+FLGHAGFYR
Sbjct: 339 LTLNWEKCHFMVKQGIVLGHVVSNRGIEVDKAKVDIISNLPPPKTVKDVRSFLGHAGFYR 398

Query: 128 RFIKDFSKIARPLTNLLLKDAIFDFNYNCKHAFETLKAALTS 3
           RFIKDFSKIARPLTNLL KD  F F+ +C  AFE LK  LT+
Sbjct: 399 RFIKDFSKIARPLTNLLAKDTSFVFSPDCLKAFEYLKKELTT 440


>ref|XP_003525980.1| PREDICTED: uncharacterized protein LOC100792198 [Glycine max]
          Length = 920

 Score =  148 bits (373), Expect = 5e-34
 Identities = 70/102 (68%), Positives = 85/102 (83%)
 Frame = -1

Query: 308 LVLNWEKCHFMVKKGIVLGHIVSSDGIEVDKAKLDKMASLPIPRTVREIRAFLGHAGFYR 129
           LVLN+EKCHFMV++GIVLGHI+S+ GIEVD AK+  ++ LP P  VRE+R+FLGHAGFYR
Sbjct: 274 LVLNFEKCHFMVEQGIVLGHIISNKGIEVDPAKISVISQLPYPSCVREVRSFLGHAGFYR 333

Query: 128 RFIKDFSKIARPLTNLLLKDAIFDFNYNCKHAFETLKAALTS 3
           RFI+DFSK+A PL+NLL K+  FDFN  CK AF+ LK ALTS
Sbjct: 334 RFIRDFSKVALPLSNLLQKEVEFDFNDRCKEAFDCLKRALTS 375


>gb|ABG37658.1| integrase [Populus trichocarpa]
          Length = 1139

 Score =  148 bits (373), Expect = 5e-34
 Identities = 69/102 (67%), Positives = 87/102 (85%)
 Frame = -1

Query: 308 LVLNWEKCHFMVKKGIVLGHIVSSDGIEVDKAKLDKMASLPIPRTVREIRAFLGHAGFYR 129
           LVLNWEKCHFMV  GIVLGHIVSS GIEVDK+K++ +A+LP P++V+++R+FLGHAGFYR
Sbjct: 527 LVLNWEKCHFMVTNGIVLGHIVSSKGIEVDKSKIELIANLPTPKSVKDVRSFLGHAGFYR 586

Query: 128 RFIKDFSKIARPLTNLLLKDAIFDFNYNCKHAFETLKAALTS 3
           RFIKDFS I++PL+NLL KD IF++  +C+ AF  LK  LTS
Sbjct: 587 RFIKDFSVISKPLSNLLTKDNIFEWTEHCEEAFVKLKNLLTS 628


>dbj|BAB02630.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 897

 Score =  145 bits (367), Expect = 3e-33
 Identities = 69/102 (67%), Positives = 83/102 (81%)
 Frame = -1

Query: 308 LVLNWEKCHFMVKKGIVLGHIVSSDGIEVDKAKLDKMASLPIPRTVREIRAFLGHAGFYR 129
           LVLNWEKCHFMVK+GIVLGH +S  GIEVDK K++ M  L  P+TV+EIR+FLGHAGFYR
Sbjct: 242 LVLNWEKCHFMVKEGIVLGHKISEKGIEVDKGKVEVMMQLQPPKTVKEIRSFLGHAGFYR 301

Query: 128 RFIKDFSKIARPLTNLLLKDAIFDFNYNCKHAFETLKAALTS 3
           RFIKDFSKI RPLT LL K+  F+F+ +C  +F+T+K AL S
Sbjct: 302 RFIKDFSKIVRPLTRLLCKETEFEFDEDCLKSFQTIKDALVS 343