BLASTX nr result

ID: Coptis25_contig00043009 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043009
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275092.2| PREDICTED: valyl-tRNA synthetase-like [Vitis...   151   5e-35
emb|CBI31848.3| unnamed protein product [Vitis vinifera]              151   5e-35
ref|XP_002530379.1| valyl-tRNA synthetase, putative [Ricinus com...   150   8e-35
ref|NP_172913.1| Valyl-tRNA synthetase [Arabidopsis thaliana] gi...   150   1e-34
gb|AAL32771.1| similar to valyl tRNA synthetase [Arabidopsis tha...   150   1e-34

>ref|XP_002275092.2| PREDICTED: valyl-tRNA synthetase-like [Vitis vinifera]
          Length = 1071

 Score =  151 bits (382), Expect = 5e-35
 Identities = 70/98 (71%), Positives = 85/98 (86%)
 Frame = +3

Query: 3   DGKINSNGGYEFERMPRFKARAAVIEALKKKGLHRGVKNNEMSLAVCSRSNDVVEPMINP 182
           DGKINSNGG EF  MPRFKAR AV+ AL +KGL++G K+NEM L +CSR+ DVVEP+I P
Sbjct: 413 DGKINSNGGPEFAGMPRFKAREAVVAALHEKGLYKGAKDNEMRLGLCSRTKDVVEPLIKP 472

Query: 183 QWFVNCALMAKEALDAVVDDENKKIEIIPKKYAADWKR 296
           QW+V+C+ +A EALDAV+DDEN+KIEIIPK+YAADWKR
Sbjct: 473 QWYVSCSGIANEALDAVMDDENRKIEIIPKQYAADWKR 510


>emb|CBI31848.3| unnamed protein product [Vitis vinifera]
          Length = 1106

 Score =  151 bits (382), Expect = 5e-35
 Identities = 70/98 (71%), Positives = 85/98 (86%)
 Frame = +3

Query: 3   DGKINSNGGYEFERMPRFKARAAVIEALKKKGLHRGVKNNEMSLAVCSRSNDVVEPMINP 182
           DGKINSNGG EF  MPRFKAR AV+ AL +KGL++G K+NEM L +CSR+ DVVEP+I P
Sbjct: 448 DGKINSNGGPEFAGMPRFKAREAVVAALHEKGLYKGAKDNEMRLGLCSRTKDVVEPLIKP 507

Query: 183 QWFVNCALMAKEALDAVVDDENKKIEIIPKKYAADWKR 296
           QW+V+C+ +A EALDAV+DDEN+KIEIIPK+YAADWKR
Sbjct: 508 QWYVSCSGIANEALDAVMDDENRKIEIIPKQYAADWKR 545


>ref|XP_002530379.1| valyl-tRNA synthetase, putative [Ricinus communis]
           gi|223530096|gb|EEF32012.1| valyl-tRNA synthetase,
           putative [Ricinus communis]
          Length = 1065

 Score =  150 bits (380), Expect = 8e-35
 Identities = 70/98 (71%), Positives = 80/98 (81%)
 Frame = +3

Query: 3   DGKINSNGGYEFERMPRFKARAAVIEALKKKGLHRGVKNNEMSLAVCSRSNDVVEPMINP 182
           DGKINSNGG EF  +PRF+AR AV EAL++KGL+RG KNNEM L  CSRSN+VVEPMI P
Sbjct: 408 DGKINSNGGSEFTGIPRFRAREAVTEALQEKGLYRGAKNNEMRLGCCSRSNEVVEPMIKP 467

Query: 183 QWFVNCALMAKEALDAVVDDENKKIEIIPKKYAADWKR 296
           QWFVNC+ MAK+ALDA  D EN K+E  PK+Y ADWKR
Sbjct: 468 QWFVNCSTMAKQALDAAFDGENPKLEFFPKQYLADWKR 505


>ref|NP_172913.1| Valyl-tRNA synthetase [Arabidopsis thaliana]
           gi|21542452|sp|P93736.2|SYV_ARATH RecName:
           Full=Valine--tRNA ligase; AltName: Full=Valyl-tRNA
           synthetase; Short=ValRS gi|332191069|gb|AEE29190.1|
           Valyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 1108

 Score =  150 bits (379), Expect = 1e-34
 Identities = 64/98 (65%), Positives = 83/98 (84%)
 Frame = +3

Query: 3   DGKINSNGGYEFERMPRFKARAAVIEALKKKGLHRGVKNNEMSLAVCSRSNDVVEPMINP 182
           DGKIN+NGG +F  MPRF AR AV+EAL+K+GL+RG KNNEM L +CSR+NDV+EPMI P
Sbjct: 450 DGKINTNGGSDFAGMPRFAAREAVVEALQKQGLYRGAKNNEMRLGLCSRTNDVIEPMIKP 509

Query: 183 QWFVNCALMAKEALDAVVDDENKKIEIIPKKYAADWKR 296
           QW+VNC+++ KEALD  + DENKK+E +PK+Y A+W+R
Sbjct: 510 QWYVNCSMIGKEALDVAITDENKKLEFVPKQYTAEWRR 547


>gb|AAL32771.1| similar to valyl tRNA synthetase [Arabidopsis thaliana]
           gi|38564252|gb|AAR23705.1| At1g14610 [Arabidopsis
           thaliana]
          Length = 1064

 Score =  150 bits (379), Expect = 1e-34
 Identities = 64/98 (65%), Positives = 83/98 (84%)
 Frame = +3

Query: 3   DGKINSNGGYEFERMPRFKARAAVIEALKKKGLHRGVKNNEMSLAVCSRSNDVVEPMINP 182
           DGKIN+NGG +F  MPRF AR AV+EAL+K+GL+RG KNNEM L +CSR+NDV+EPMI P
Sbjct: 406 DGKINTNGGSDFAGMPRFAAREAVVEALQKQGLYRGAKNNEMRLGLCSRTNDVIEPMIKP 465

Query: 183 QWFVNCALMAKEALDAVVDDENKKIEIIPKKYAADWKR 296
           QW+VNC+++ KEALD  + DENKK+E +PK+Y A+W+R
Sbjct: 466 QWYVNCSMIGKEALDVAITDENKKLEFVPKQYTAEWRR 503


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