BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042999
         (462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002535305.1| conserved hypothetical protein [Ricinus comm...   207   7e-52
ref|YP_588335.1| hypothetical protein ZeamMp073 [Zea mays subsp....    91   1e-35
ref|YP_002608359.1| orf104 [Vitis vinifera] gi|209954156|emb|CAQ...   140   8e-32
ref|YP_173422.1| hypothetical protein NitaMp080 [Nicotiana tabac...   136   2e-30
ref|YP_005090415.1| orf3 gene product (mitochondrion) [Boea hygr...   129   2e-28

>ref|XP_002535305.1| conserved hypothetical protein [Ricinus communis]
           gi|223523491|gb|EEF27078.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 183

 Score =  207 bits (527), Expect = 7e-52
 Identities = 102/131 (77%), Positives = 103/131 (78%)
 Frame = -1

Query: 393 MNCRVDRSDPDAAVAPRRYGLDPLLPTPGHHSMSGIRGDILDVTTPWGLCRPAFRSIHS* 214
           MNCRVDRSDPDAAVAPRRYGLDPLLP PG+HSMSGIRGDILDV                 
Sbjct: 1   MNCRVDRSDPDAAVAPRRYGLDPLLPIPGYHSMSGIRGDILDV----------------- 43

Query: 213 GGRSRTLQVWERSWSGKAKTAPRIWVARGRLCPDGGALWGRAQPNRDSTPPTSSAPLYRL 34
                    WERSWSGKAKTAPRIWVARGRLCPDGGALWGRAQPNRDSTPPTSSAPLYRL
Sbjct: 44  ---------WERSWSGKAKTAPRIWVARGRLCPDGGALWGRAQPNRDSTPPTSSAPLYRL 94

Query: 33  NHSKGLVGGTG 1
           NHS GLVGGTG
Sbjct: 95  NHSNGLVGGTG 105


>ref|YP_588335.1| hypothetical protein ZeamMp073 [Zea mays subsp. mays]
           gi|40795119|gb|AAR91163.1| hypothetical protein
           (mitochondrion) [Zea mays]
          Length = 105

 Score = 90.5 bits (223), Expect(2) = 1e-35
 Identities = 43/46 (93%), Positives = 43/46 (93%)
 Frame = +3

Query: 309 PGWVGAGRVRIAAEQQQRPDLIYLLGNSSGDFTVAKEAPRSIKHFR 446
           PGWVGAGRVRI AEQ QRPD IYLLGNSSGDFTVAKEAPRSIKHFR
Sbjct: 60  PGWVGAGRVRITAEQLQRPDQIYLLGNSSGDFTVAKEAPRSIKHFR 105



 Score = 84.3 bits (207), Expect(2) = 1e-35
 Identities = 48/68 (70%), Positives = 49/68 (72%), Gaps = 8/68 (11%)
 Frame = +2

Query: 143 MRGAVLAFPDQDRSHTCSVRDRPPQLCIDRKAGRHSPQ--GVVTSSMSPL------IPDM 298
           M+GAVLA P QDRS TC VRDRPPQLCIDRKAGR SPQ  GVVTSSMSPL      IP  
Sbjct: 1   MQGAVLALPSQDRSRTCHVRDRPPQLCIDRKAGRQSPQPTGVVTSSMSPLDSRHAMIPHP 60

Query: 299 LWCPGVGR 322
            W  G GR
Sbjct: 61  GWV-GAGR 67


>ref|YP_002608359.1| orf104 [Vitis vinifera] gi|209954156|emb|CAQ77593.1| orf104 [Vitis
           vinifera] gi|239764779|gb|ACS15247.1| ORF104 [Vitis
           vinifera]
          Length = 103

 Score =  140 bits (354), Expect = 8e-32
 Identities = 66/76 (86%), Positives = 69/76 (90%), Gaps = 3/76 (3%)
 Frame = +3

Query: 228 IERQGGT---APREWLRPVCPPLFPTCYGAPGWVGAGRVRIAAEQQQRPDLIYLLGNSSG 398
           I+R+ G     PREWLRPVCPPLFPTCYGAPGW+GAGRVRIAAEQQ RPDLIYLLGNSSG
Sbjct: 28  IDRKAGRHSPQPREWLRPVCPPLFPTCYGAPGWIGAGRVRIAAEQQPRPDLIYLLGNSSG 87

Query: 399 DFTVAKEAPRSIKHFR 446
           DFTVAKEAPRSIKHFR
Sbjct: 88  DFTVAKEAPRSIKHFR 103



 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 42/59 (71%), Positives = 43/59 (72%), Gaps = 2/59 (3%)
 Frame = +2

Query: 143 MRGAVLAFPDQDRSHTCSVRDRPPQLCIDRKAGRHSPQ--GVVTSSMSPLIPDMLWCPG 313
           MRGAVLA PDQDRSHTCSVRDRPPQLCIDRKAGRHSPQ    +     PL P     PG
Sbjct: 1   MRGAVLALPDQDRSHTCSVRDRPPQLCIDRKAGRHSPQPREWLRPVCPPLFPTCYGAPG 59


>ref|YP_173422.1| hypothetical protein NitaMp080 [Nicotiana tabacum]
           gi|56806586|dbj|BAD83487.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 103

 Score =  136 bits (343), Expect = 2e-30
 Identities = 65/76 (85%), Positives = 67/76 (88%), Gaps = 3/76 (3%)
 Frame = +3

Query: 228 IERQGGT---APREWLRPVCPPLFPTCYGAPGWVGAGRVRIAAEQQQRPDLIYLLGNSSG 398
           I+R+ G     PREWLRPVCPPLFPTCYG P WVGAGRVRIAAEQQ RPDLIYLLGNSSG
Sbjct: 28  IDRKAGRHSPQPREWLRPVCPPLFPTCYGTPEWVGAGRVRIAAEQQPRPDLIYLLGNSSG 87

Query: 399 DFTVAKEAPRSIKHFR 446
           DFTVAKEAPRSIKHFR
Sbjct: 88  DFTVAKEAPRSIKHFR 103



 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 38/38 (100%), Positives = 38/38 (100%)
 Frame = +2

Query: 143 MRGAVLAFPDQDRSHTCSVRDRPPQLCIDRKAGRHSPQ 256
           MRGAVLAFPDQDRSHTCSVRDRPPQLCIDRKAGRHSPQ
Sbjct: 1   MRGAVLAFPDQDRSHTCSVRDRPPQLCIDRKAGRHSPQ 38


>ref|YP_005090415.1| orf3 gene product (mitochondrion) [Boea hygrometrica]
           gi|340549503|gb|AEK53324.1| hypothetical protein
           (mitochondrion) [Boea hygrometrica]
          Length = 103

 Score =  129 bits (324), Expect = 2e-28
 Identities = 63/76 (82%), Positives = 65/76 (85%), Gaps = 3/76 (3%)
 Frame = +3

Query: 228 IERQGGT---APREWLRPVCPPLFPTCYGAPGWVGAGRVRIAAEQQQRPDLIYLLGNSSG 398
           I+R+GG      RE LRPVCPPLFPTCYGAPGWVGAGR R AAEQQ RPDLIYLLGNSS 
Sbjct: 28  IDRRGGRHSPQQRECLRPVCPPLFPTCYGAPGWVGAGRARSAAEQQPRPDLIYLLGNSSS 87

Query: 399 DFTVAKEAPRSIKHFR 446
           DFTVAKEAPRSIKHFR
Sbjct: 88  DFTVAKEAPRSIKHFR 103



 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 44/69 (63%), Positives = 48/69 (69%), Gaps = 5/69 (7%)
 Frame = +2

Query: 143 MRGAVLAFPDQDRSHTCSVRDRPPQLCIDRKAGRHSPQ--GVVTSSMSPLIPDMLWCP-- 310
           MRGAVLAFPDQDRSHTCSVRDRPPQLCIDR+ GRHSPQ    +     PL P     P  
Sbjct: 1   MRGAVLAFPDQDRSHTCSVRDRPPQLCIDRRGGRHSPQQRECLRPVCPPLFPTCYGAPGW 60

Query: 311 -GVGRSGSS 334
            G GR+ S+
Sbjct: 61  VGAGRARSA 69