BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042979
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_007507118.1| ATP synthase CF1 beta subunit (chloroplast) ...   199   1e-49
gb|AGE93205.1| ATP synthase CF1 beta subunit [Calectasia narragara]   199   1e-49
ref|YP_007353922.1| ATP synthase CF1 beta subunit (chloroplast) ...   199   1e-49
ref|YP_007317255.1| ATP synthase CF1 beta subunit (chloroplast) ...   199   1e-49
ref|YP_086973.1| ATP synthase CF1 beta subunit [Panax ginseng] g...   199   1e-49

>ref|YP_007507118.1| ATP synthase CF1 beta subunit (chloroplast) [Salvia miltiorrhiza]
           gi|401879749|gb|AFQ30936.1| ATP synthase CF1 beta
           subunit (chloroplast) [Salvia miltiorrhiza]
          Length = 498

 Score =  199 bits (507), Expect = 1e-49
 Identities = 102/102 (100%), Positives = 102/102 (100%)
 Frame = +3

Query: 3   SIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGE 182
           SIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGE
Sbjct: 323 SIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGE 382

Query: 183 EHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARA 308
           EHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARA
Sbjct: 383 EHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARA 424


>gb|AGE93205.1| ATP synthase CF1 beta subunit [Calectasia narragara]
          Length = 498

 Score =  199 bits (507), Expect = 1e-49
 Identities = 102/102 (100%), Positives = 102/102 (100%)
 Frame = +3

Query: 3   SIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGE 182
           SIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGE
Sbjct: 323 SIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGE 382

Query: 183 EHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARA 308
           EHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARA
Sbjct: 383 EHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARA 424


>ref|YP_007353922.1| ATP synthase CF1 beta subunit (chloroplast) [Tectona grandis]
           gi|438687611|emb|CCP47137.1| ATP synthase CF1 beta
           subunit (chloroplast) [Tectona grandis]
           gi|438688295|emb|CCP47226.1| ATP synthase CF1 beta
           subunit (chloroplast) [Tectona grandis]
           gi|438688419|emb|CCP47315.1| ATP synthase CF1 beta
           subunit (chloroplast) [Tectona grandis]
          Length = 498

 Score =  199 bits (507), Expect = 1e-49
 Identities = 102/102 (100%), Positives = 102/102 (100%)
 Frame = +3

Query: 3   SIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGE 182
           SIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGE
Sbjct: 323 SIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGE 382

Query: 183 EHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARA 308
           EHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARA
Sbjct: 383 EHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARA 424


>ref|YP_007317255.1| ATP synthase CF1 beta subunit (chloroplast) [Camellia sinensis]
           gi|430728279|gb|AGA55603.1| ATP synthase CF1 beta
           subunit (chloroplast) [Camellia sinensis]
          Length = 498

 Score =  199 bits (507), Expect = 1e-49
 Identities = 102/102 (100%), Positives = 102/102 (100%)
 Frame = +3

Query: 3   SIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGE 182
           SIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGE
Sbjct: 323 SIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGE 382

Query: 183 EHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARA 308
           EHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARA
Sbjct: 383 EHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARA 424


>ref|YP_086973.1| ATP synthase CF1 beta subunit [Panax ginseng]
           gi|75322810|sp|Q68RZ9.1|ATPB_PANGI RecName: Full=ATP
           synthase subunit beta, chloroplastic; AltName: Full=ATP
           synthase F1 sector subunit beta; AltName: Full=F-ATPase
           subunit beta gi|51235320|gb|AAT98516.1| ATPase beta
           subunit [Panax ginseng]
          Length = 498

 Score =  199 bits (507), Expect = 1e-49
 Identities = 102/102 (100%), Positives = 102/102 (100%)
 Frame = +3

Query: 3   SIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGE 182
           SIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGE
Sbjct: 323 SIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGE 382

Query: 183 EHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARA 308
           EHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARA
Sbjct: 383 EHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARA 424