BLASTX nr result

ID: Coptis25_contig00042956 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042956
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529728.1| PREDICTED: zinc finger protein NUTCRACKER-li...    56   3e-06

>ref|XP_003529728.1| PREDICTED: zinc finger protein NUTCRACKER-like [Glycine max]
          Length = 498

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 43/127 (33%), Positives = 60/127 (47%), Gaps = 23/127 (18%)
 Frame = +1

Query: 1   HRPFCDALAREAGRVQTSPIIPPRYHFSQ-------QTQQNPSLI--FPSSNQ------- 132
           HR FCDALA E+ R   +P++PP+   S        QTQ NP  +  FP   +       
Sbjct: 207 HRAFCDALAEESARAIANPLLPPQQQQSSSSHMSTLQTQFNPQNLHAFPLKKEMPPWLGP 266

Query: 133 ------NHPLTINSWDTLSPPIQQQQVNFFQKPNMTQFSN-STAHMSATAILQQAANVSA 291
                 +H L+ +S    SPP  Q+  N    P +  +      HMSATA+LQ+AA + A
Sbjct: 267 PATVVVDHHLSSSSSIMFSPP-HQENPNPSLGPTLAAYQTVPNPHMSATALLQKAAQMGA 325

Query: 292 GSISSGA 312
               SG+
Sbjct: 326 TMSRSGS 332


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