BLASTX nr result

ID: Coptis25_contig00042952 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042952
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318560.1| predicted protein [Populus trichocarpa] gi|2...   221   6e-56
ref|XP_002273001.1| PREDICTED: peptidyl-prolyl cis-trans isomera...   219   2e-55
emb|CBI15402.3| unnamed protein product [Vitis vinifera]              219   2e-55
ref|XP_003609079.1| Peptidyl-prolyl cis-trans isomerase [Medicag...   213   1e-53
ref|XP_002511993.1| peptidyl-prolyl cis-trans isomerase B, ppib,...   211   4e-53

>ref|XP_002318560.1| predicted protein [Populus trichocarpa] gi|222859233|gb|EEE96780.1|
           predicted protein [Populus trichocarpa]
          Length = 328

 Score =  221 bits (562), Expect = 6e-56
 Identities = 108/137 (78%), Positives = 124/137 (90%)
 Frame = +3

Query: 3   RFSNLVSGAAGISYRRKEFTKITPNYVQHGGVRSYGVDAELARQTGGNLAADSLIEELER 182
           RFS+LV GAAG+SYRRKEF KITPNYVQHGGVRSYGVDAELA++TG NLAA+SL++E +R
Sbjct: 137 RFSDLVRGAAGVSYRRKEFIKITPNYVQHGGVRSYGVDAELAQRTGSNLAAESLVDEWQR 196

Query: 183 LNEKCPGTKNKAASVSIVVRDPNKAPPKLKLVARKGKLEIDEEEVGTSPNGTEFVISTRD 362
             E CPG KN A +VSI+VRDP+K PPKLKLVARKGKLEID+EEVGT PNGTEFVI+T+D
Sbjct: 197 EYETCPGIKNLAGTVSIIVRDPSKPPPKLKLVARKGKLEIDQEEVGTDPNGTEFVIATKD 256

Query: 363 SPQLDASSLVVGTVLDG 413
           SP+LDASSLVVG VL+G
Sbjct: 257 SPELDASSLVVGRVLEG 273


>ref|XP_002273001.1| PREDICTED: peptidyl-prolyl cis-trans isomerase B-like [Vitis
           vinifera]
          Length = 323

 Score =  219 bits (558), Expect = 2e-55
 Identities = 106/137 (77%), Positives = 121/137 (88%)
 Frame = +3

Query: 3   RFSNLVSGAAGISYRRKEFTKITPNYVQHGGVRSYGVDAELARQTGGNLAADSLIEELER 182
           RFS LVSGAAGISYRRKEF KI PNYVQHGGVRSYGVDAELA++TG NLAA+SL+ E E+
Sbjct: 131 RFSGLVSGAAGISYRRKEFVKIMPNYVQHGGVRSYGVDAELAKRTGSNLAAESLVTEWEK 190

Query: 183 LNEKCPGTKNKAASVSIVVRDPNKAPPKLKLVARKGKLEIDEEEVGTSPNGTEFVISTRD 362
           +NEKCPGTKN A SV IVVRDP K PPK+KLVAR GKLEIDEE+VG  PNGTEFVI+++D
Sbjct: 191 MNEKCPGTKNLAGSVGIVVRDPTKPPPKIKLVARGGKLEIDEEDVGADPNGTEFVITSKD 250

Query: 363 SPQLDASSLVVGTVLDG 413
           SP+LD S+LV+G VL+G
Sbjct: 251 SPELDTSTLVIGRVLEG 267


>emb|CBI15402.3| unnamed protein product [Vitis vinifera]
          Length = 366

 Score =  219 bits (558), Expect = 2e-55
 Identities = 106/137 (77%), Positives = 121/137 (88%)
 Frame = +3

Query: 3   RFSNLVSGAAGISYRRKEFTKITPNYVQHGGVRSYGVDAELARQTGGNLAADSLIEELER 182
           RFS LVSGAAGISYRRKEF KI PNYVQHGGVRSYGVDAELA++TG NLAA+SL+ E E+
Sbjct: 174 RFSGLVSGAAGISYRRKEFVKIMPNYVQHGGVRSYGVDAELAKRTGSNLAAESLVTEWEK 233

Query: 183 LNEKCPGTKNKAASVSIVVRDPNKAPPKLKLVARKGKLEIDEEEVGTSPNGTEFVISTRD 362
           +NEKCPGTKN A SV IVVRDP K PPK+KLVAR GKLEIDEE+VG  PNGTEFVI+++D
Sbjct: 234 MNEKCPGTKNLAGSVGIVVRDPTKPPPKIKLVARGGKLEIDEEDVGADPNGTEFVITSKD 293

Query: 363 SPQLDASSLVVGTVLDG 413
           SP+LD S+LV+G VL+G
Sbjct: 294 SPELDTSTLVIGRVLEG 310


>ref|XP_003609079.1| Peptidyl-prolyl cis-trans isomerase [Medicago truncatula]
           gi|357477653|ref|XP_003609112.1| Peptidyl-prolyl
           cis-trans isomerase [Medicago truncatula]
           gi|355510134|gb|AES91276.1| Peptidyl-prolyl cis-trans
           isomerase [Medicago truncatula]
           gi|355510167|gb|AES91309.1| Peptidyl-prolyl cis-trans
           isomerase [Medicago truncatula]
          Length = 322

 Score =  213 bits (542), Expect = 1e-53
 Identities = 103/137 (75%), Positives = 118/137 (86%)
 Frame = +3

Query: 3   RFSNLVSGAAGISYRRKEFTKITPNYVQHGGVRSYGVDAELARQTGGNLAADSLIEELER 182
           RFS +VSGAAGISYRRKEF KI PNYVQHGG+RSYGVDAELA +TG NLA + L+EE E 
Sbjct: 130 RFSKIVSGAAGISYRRKEFVKIMPNYVQHGGLRSYGVDAELANKTGSNLATEKLVEEWES 189

Query: 183 LNEKCPGTKNKAASVSIVVRDPNKAPPKLKLVARKGKLEIDEEEVGTSPNGTEFVISTRD 362
           + EKCPGTKN A SV I+VRDP+K PPK KLVAR GKLEID+EEVGT PNGTEFVI+T+D
Sbjct: 190 VYEKCPGTKNVAGSVGIIVRDPSKPPPKFKLVARLGKLEIDQEEVGTDPNGTEFVIATKD 249

Query: 363 SPQLDASSLVVGTVLDG 413
           SP+LDAS+LV+G V+ G
Sbjct: 250 SPELDASTLVIGRVVGG 266


>ref|XP_002511993.1| peptidyl-prolyl cis-trans isomerase B, ppib, putative [Ricinus
           communis] gi|223549173|gb|EEF50662.1| peptidyl-prolyl
           cis-trans isomerase B, ppib, putative [Ricinus communis]
          Length = 329

 Score =  211 bits (538), Expect = 4e-53
 Identities = 106/137 (77%), Positives = 121/137 (88%)
 Frame = +3

Query: 3   RFSNLVSGAAGISYRRKEFTKITPNYVQHGGVRSYGVDAELARQTGGNLAADSLIEELER 182
           RFS+LVSGAAGISYRRKEF KI PNYVQHGGVRSYGVDAELA+ TG NLAA+SL +E +R
Sbjct: 138 RFSSLVSGAAGISYRRKEFIKIMPNYVQHGGVRSYGVDAELAKSTGSNLAAESLADEWDR 197

Query: 183 LNEKCPGTKNKAASVSIVVRDPNKAPPKLKLVARKGKLEIDEEEVGTSPNGTEFVISTRD 362
            NE C G KN A +VSI+VRDP K PPKLKL+ARKGKLEID+EEVGT PNGTEFVI+T+D
Sbjct: 198 ENE-CSGIKNLAGTVSIIVRDPLKPPPKLKLIARKGKLEIDQEEVGTDPNGTEFVIATKD 256

Query: 363 SPQLDASSLVVGTVLDG 413
           SP+LDAS+LV+G VL+G
Sbjct: 257 SPELDASNLVIGRVLEG 273


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