BLASTX nr result

ID: Coptis25_contig00042933 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042933
         (240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138782.1| PREDICTED: serine/threonine-protein kinase A...    77   1e-12
ref|XP_004160781.1| PREDICTED: serine/threonine-protein kinase A...    77   2e-12
ref|XP_002516588.1| afc, putative [Ricinus communis] gi|22354440...    77   2e-12
ref|XP_003522682.1| PREDICTED: LOW QUALITY PROTEIN: serine/threo...    75   6e-12
ref|XP_002308625.1| predicted protein [Populus trichocarpa] gi|2...    75   6e-12

>ref|XP_004138782.1| PREDICTED: serine/threonine-protein kinase AFC3-like [Cucumis
           sativus]
          Length = 400

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 39/76 (51%), Positives = 48/76 (63%), Gaps = 6/76 (7%)
 Frame = +2

Query: 29  LRETEYRRNRKRPRVGGTWDVEPSTSNSKAIIRLAP------VSPPLREDDSKGHYVFNY 190
           + + + R +RKRPR    WDV P    +   + +        VSPP R+DD +GHYVFN 
Sbjct: 6   MEKEQQRTSRKRPR--SAWDVVPPAQEANKALAVVKNEVKRHVSPPRRDDDREGHYVFNL 63

Query: 191 GENLTPRYKILSKMGE 238
           GENLTPRYKILSKMGE
Sbjct: 64  GENLTPRYKILSKMGE 79


>ref|XP_004160781.1| PREDICTED: serine/threonine-protein kinase AFC3-like [Cucumis
           sativus]
          Length = 400

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 39/76 (51%), Positives = 47/76 (61%), Gaps = 6/76 (7%)
 Frame = +2

Query: 29  LRETEYRRNRKRPRVGGTWDVEPSTSNSKAIIRLAP------VSPPLREDDSKGHYVFNY 190
           + + + R  RKRPR    WDV P    +   + +        VSPP R+DD +GHYVFN 
Sbjct: 6   MEKEQQRTTRKRPR--SAWDVVPPAQEANKALAVVKNEVKRHVSPPRRDDDREGHYVFNL 63

Query: 191 GENLTPRYKILSKMGE 238
           GENLTPRYKILSKMGE
Sbjct: 64  GENLTPRYKILSKMGE 79


>ref|XP_002516588.1| afc, putative [Ricinus communis] gi|223544408|gb|EEF45929.1| afc,
           putative [Ricinus communis]
          Length = 403

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 41/79 (51%), Positives = 49/79 (62%), Gaps = 8/79 (10%)
 Frame = +2

Query: 26  ELRETEYRRNRKRPRVGGTWDVEPSTSNSKAIIRLAP--------VSPPLREDDSKGHYV 181
           E+   E  R RKRPR+   WDV+PS    +  + +           SPP R+DD +GHYV
Sbjct: 5   EVDTVEKERVRKRPRLA--WDVKPSEPEVQRALAIVGNEGPTTRHASPPRRDDDREGHYV 62

Query: 182 FNYGENLTPRYKILSKMGE 238
           FN GENLTPRYKILSKMGE
Sbjct: 63  FNLGENLTPRYKILSKMGE 81


>ref|XP_003522682.1| PREDICTED: LOW QUALITY PROTEIN: serine/threonine-protein kinase
           AFC3-like [Glycine max]
          Length = 398

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 41/75 (54%), Positives = 46/75 (61%), Gaps = 9/75 (12%)
 Frame = +2

Query: 41  EYRRNRKRPRVGGTWDVEPSTSNSKAIIRLAP---------VSPPLREDDSKGHYVFNYG 193
           E  R RKRPR+   WDV P + +        P         VSPP R+DD +GHYVFN G
Sbjct: 10  ERERTRKRPRLA--WDVAPPSVSEAQRALPVPGDEEFERKHVSPPKRDDDREGHYVFNLG 67

Query: 194 ENLTPRYKILSKMGE 238
           ENLTPRYKILSKMGE
Sbjct: 68  ENLTPRYKILSKMGE 82


>ref|XP_002308625.1| predicted protein [Populus trichocarpa] gi|222854601|gb|EEE92148.1|
           predicted protein [Populus trichocarpa]
          Length = 404

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 41/76 (53%), Positives = 48/76 (63%), Gaps = 7/76 (9%)
 Frame = +2

Query: 32  RETEYRRNRKRPRVGGTWDVEPSTSNSKAII-------RLAPVSPPLREDDSKGHYVFNY 190
           R  + +R RKRPR    WDV P+    +A +           VSPP REDD +GHY+FN 
Sbjct: 10  RMEKQQRVRKRPRFA--WDVGPAQPEERAPVVARNEGMAARYVSPPRREDDREGHYMFNL 67

Query: 191 GENLTPRYKILSKMGE 238
           GENLTPRYKILSKMGE
Sbjct: 68  GENLTPRYKILSKMGE 83


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