BLASTX nr result
ID: Coptis25_contig00042917
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00042917 (204 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004161121.1| PREDICTED: probable polygalacturonase-like [... 107 8e-22 ref|XP_004144044.1| PREDICTED: probable polygalacturonase-like [... 107 8e-22 gb|AFK48190.1| unknown [Lotus japonicus] 107 1e-21 ref|XP_002516244.1| polygalacturonase, putative [Ricinus communi... 106 2e-21 ref|XP_003551103.1| PREDICTED: probable polygalacturonase-like i... 105 3e-21 >ref|XP_004161121.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus] Length = 493 Score = 107 bits (268), Expect = 8e-22 Identities = 50/64 (78%), Positives = 54/64 (84%) Frame = -3 Query: 193 PFPVLRPFLFNLTDFGGKGDGTTLNTKAFERGVAAIAKLRKKGGGQLNVPAGYWLTAPFN 14 P P LRP +FNLTDFG GDG TLNTKAFE+ + AI+KLR KGGGQLNVPAG WLTAPFN Sbjct: 66 PLPRLRPAVFNLTDFGAVGDGVTLNTKAFEKAILAISKLRTKGGGQLNVPAGRWLTAPFN 125 Query: 13 LTSH 2 LTSH Sbjct: 126 LTSH 129 >ref|XP_004144044.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus] Length = 493 Score = 107 bits (268), Expect = 8e-22 Identities = 50/64 (78%), Positives = 54/64 (84%) Frame = -3 Query: 193 PFPVLRPFLFNLTDFGGKGDGTTLNTKAFERGVAAIAKLRKKGGGQLNVPAGYWLTAPFN 14 P P LRP +FNLTDFG GDG TLNTKAFE+ + AI+KLR KGGGQLNVPAG WLTAPFN Sbjct: 66 PLPRLRPAVFNLTDFGAVGDGVTLNTKAFEKAILAISKLRTKGGGQLNVPAGRWLTAPFN 125 Query: 13 LTSH 2 LTSH Sbjct: 126 LTSH 129 >gb|AFK48190.1| unknown [Lotus japonicus] Length = 482 Score = 107 bits (267), Expect = 1e-21 Identities = 50/62 (80%), Positives = 54/62 (87%) Frame = -3 Query: 187 PVLRPFLFNLTDFGGKGDGTTLNTKAFERGVAAIAKLRKKGGGQLNVPAGYWLTAPFNLT 8 P+LRP FNLTDFGG GDG TLNT AFER V+AI+KLR+KGGGQLNVP G WLTAPFNLT Sbjct: 57 PLLRPVAFNLTDFGGVGDGVTLNTVAFERAVSAISKLREKGGGQLNVPPGLWLTAPFNLT 116 Query: 7 SH 2 SH Sbjct: 117 SH 118 >ref|XP_002516244.1| polygalacturonase, putative [Ricinus communis] gi|223544730|gb|EEF46246.1| polygalacturonase, putative [Ricinus communis] Length = 494 Score = 106 bits (265), Expect = 2e-21 Identities = 50/64 (78%), Positives = 53/64 (82%) Frame = -3 Query: 193 PFPVLRPFLFNLTDFGGKGDGTTLNTKAFERGVAAIAKLRKKGGGQLNVPAGYWLTAPFN 14 P P LRP FNLTDFGG GDG TLNT+AFER V AI+KL KKGGGQLNVP G W+TAPFN Sbjct: 67 PMPKLRPVAFNLTDFGGVGDGVTLNTEAFERAVLAISKLGKKGGGQLNVPPGRWVTAPFN 126 Query: 13 LTSH 2 LTSH Sbjct: 127 LTSH 130 >ref|XP_003551103.1| PREDICTED: probable polygalacturonase-like isoform 2 [Glycine max] Length = 491 Score = 105 bits (263), Expect = 3e-21 Identities = 48/64 (75%), Positives = 53/64 (82%) Frame = -3 Query: 193 PFPVLRPFLFNLTDFGGKGDGTTLNTKAFERGVAAIAKLRKKGGGQLNVPAGYWLTAPFN 14 P P+LRP FNLTDFGG GDG TLNT+AFER V+A++K KKGG QLNVP G WLTAPFN Sbjct: 65 PMPMLRPMAFNLTDFGGVGDGVTLNTEAFERAVSAVSKFGKKGGAQLNVPPGRWLTAPFN 124 Query: 13 LTSH 2 LTSH Sbjct: 125 LTSH 128