BLASTX nr result

ID: Coptis25_contig00042916 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042916
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530864.1| PREDICTED: histone-lysine N-methyltransferas...   103   1e-20
ref|XP_002525993.1| conserved hypothetical protein [Ricinus comm...    98   8e-19
ref|XP_002312459.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18
ref|XP_002281246.1| PREDICTED: histone-lysine N-methyltransferas...    95   7e-18
ref|NP_564222.1| rubisco methyltransferase-like protein [Arabido...    90   2e-16

>ref|XP_003530864.1| PREDICTED: histone-lysine N-methyltransferase setd3-like [Glycine
           max]
          Length = 472

 Score =  103 bits (257), Expect = 1e-20
 Identities = 57/96 (59%), Positives = 69/96 (71%), Gaps = 8/96 (8%)
 Frame = +1

Query: 49  CCVSSYRTLSCSA----RLLSHPPDLIRWVRGEGGFVHPALKITADTDSSYGLGLIACEE 216
           C +S  R L+C++    RL+  PPDLI+WV  EGGFVH A+KIT   DSS GLGL+A EE
Sbjct: 9   CSLSQLRPLTCASTSASRLVPQPPDLIKWVTREGGFVHRAVKIT-QLDSSNGLGLVAKEE 67

Query: 217 IPKGSHLISLPDHIPLRF----QDDSLLAHLAQKVP 312
           IP+GS LI LP H+PLRF    QD SLL HLA++VP
Sbjct: 68  IPRGSDLIVLPHHLPLRFTSLQQDPSLLHHLARQVP 103


>ref|XP_002525993.1| conserved hypothetical protein [Ricinus communis]
           gi|223534725|gb|EEF36417.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 473

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 55/94 (58%), Positives = 63/94 (67%), Gaps = 12/94 (12%)
 Frame = +1

Query: 67  RTLSCSA---RLLSHPPDLIRWVRGEGGFVHPALKITADTDSSYGLGLIACEEIPKGSHL 237
           R L+C+A   RL+SHPPDLI+WVR EGGFVH A+KI+   D   G GLI  E IPKGS L
Sbjct: 15  RPLTCAASITRLVSHPPDLIKWVRHEGGFVHQAVKIS--QDGRNGFGLIVSEAIPKGSEL 72

Query: 238 ISLPDHIPLRF---------QDDSLLAHLAQKVP 312
           I LPDHIPL+F            S+L HLAQKVP
Sbjct: 73  IVLPDHIPLKFGPLDLEGADGPPSVLVHLAQKVP 106


>ref|XP_002312459.1| predicted protein [Populus trichocarpa] gi|222852279|gb|EEE89826.1|
           predicted protein [Populus trichocarpa]
          Length = 130

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 52/99 (52%), Positives = 66/99 (66%), Gaps = 7/99 (7%)
 Frame = +1

Query: 52  CVSSYRTLSCSARLLSHPPDLIRWVRGEGGFVHPALKITADTDSSYGLGLIACEEIPKGS 231
           C +++   S   RL+ +PPDLI+WVR EGGFVH A+KI+   D + G GLIA  +IPKGS
Sbjct: 19  CAATFTASSYQERLVPNPPDLIKWVRREGGFVHQAIKIS--QDGTNGPGLIASHDIPKGS 76

Query: 232 HLISLPDHIPLRFQDD-------SLLAHLAQKVPGMNSF 327
            LI LPD+IP +F D+       S+L  LAQKVPGM  F
Sbjct: 77  QLIVLPDNIPFKFGDEDGVDEAHSVLVKLAQKVPGMYFF 115


>ref|XP_002281246.1| PREDICTED: histone-lysine N-methyltransferase setd3 [Vitis
           vinifera] gi|297737636|emb|CBI26837.3| unnamed protein
           product [Vitis vinifera]
          Length = 483

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 52/106 (49%), Positives = 68/106 (64%), Gaps = 20/106 (18%)
 Frame = +1

Query: 55  VSSYRTLSCSA-----------RLLSHPPDLIRWVRGEGGFVHPALKITADTDSSYGLGL 201
           ++ +R L+C+A           RL+ HPPDLI+WVR EGGFVH A+ I    DS  GLGL
Sbjct: 10  LTQFRPLTCAAATATATACHPGRLVPHPPDLIKWVRREGGFVHQAVTIAPSADSC-GLGL 68

Query: 202 IACEEIPKGSHLISLPDHIPLRFQD---------DSLLAHLAQKVP 312
           +A ++IPKGS LI+LP HIPLRF           DS+L +LA++VP
Sbjct: 69  VASQDIPKGSDLIALPHHIPLRFSSLESEGVDTIDSVLVNLARQVP 114


>ref|NP_564222.1| rubisco methyltransferase-like protein [Arabidopsis thaliana]
           gi|9743350|gb|AAF97974.1|AC000103_24 F21J9.27
           [Arabidopsis thaliana] gi|332192432|gb|AEE30553.1|
           rubisco methyltransferase-like protein [Arabidopsis
           thaliana]
          Length = 476

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 45/86 (52%), Positives = 62/86 (72%), Gaps = 7/86 (8%)
 Frame = +1

Query: 76  SCSARLLSHPPDLIRWVRGEGGFVHPALKITADTDSSYGLGLIACEEIPKGSHLISLPDH 255
           S  +RL  HPPDLIRW++ EGGFVH A+K++ +T   +G+GLI+ E+I  G+ LISLP H
Sbjct: 24  SLPSRLAPHPPDLIRWIKREGGFVHHAVKLSQET--QFGIGLISTEQISPGTDLISLPPH 81

Query: 256 IPLRFQDD-------SLLAHLAQKVP 312
           +PLRF+ D       SLL+ LA++VP
Sbjct: 82  VPLRFESDDSSSSSSSLLSALARRVP 107


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