BLASTX nr result

ID: Coptis25_contig00042909 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042909
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004173647.1| PREDICTED: uncharacterized LOC101217008, par...    98   8e-19
gb|AAG60150.1|AC074360_15 En/Spm-like transposon protein, putati...    89   4e-16
ref|XP_004134263.1| PREDICTED: uncharacterized protein LOC101217...    87   1e-15
ref|XP_004165999.1| PREDICTED: uncharacterized LOC101217008, par...    75   7e-12
ref|XP_002269174.2| PREDICTED: uncharacterized protein LOC100263...    72   6e-11

>ref|XP_004173647.1| PREDICTED: uncharacterized LOC101217008, partial [Cucumis sativus]
          Length = 345

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 54/128 (42%), Positives = 80/128 (62%), Gaps = 2/128 (1%)
 Frame = +1

Query: 1   KKVSNETKDSLWTVTKQKFVVPES-ARHITMRELGYLWRSSKSRFSRIIASCANEEERME 177
           +K+S  +K+ LWT  + ++ V E   R    R++G LWR+ KSR    I S +  EE ++
Sbjct: 195 RKLSTTSKEILWTSIQLRYNVKEVWQRKCIFRKMGRLWRAGKSRIVSQIQSTSTNEELVK 254

Query: 178 KRPKNIK-LEWWKSFVRKRLSKEFQAISMKFKKMRAKQNLPHTCSRKGYARLEAEMKEDS 354
            +P N++ +  W  FV+++ S  F+A S KFK M+ K  LPHTCSRKGYARL  EM++  
Sbjct: 255 MKPSNVQSMHDWMDFVKEKKSATFKAKSEKFKSMK-KMQLPHTCSRKGYARLAEEMRKSC 313

Query: 355 SNPSSVSR 378
            + SSV+R
Sbjct: 314 LDSSSVTR 321


>gb|AAG60150.1|AC074360_15 En/Spm-like transposon protein, putative [Arabidopsis thaliana]
          Length = 1431

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 48/127 (37%), Positives = 74/127 (58%), Gaps = 1/127 (0%)
 Frame = +1

Query: 1    KKVSNETKDSLWTVTKQKFVVPESARHIT-MRELGYLWRSSKSRFSRIIASCANEEERME 177
            K VS + K   W   + +F + E  + +  ++++G LWRS KSR  + I    N +++M 
Sbjct: 963  KDVSQDMKTVPWKSMQARFELDEEFQRVAVLKQMGSLWRSYKSRTVKDINLAPNNQQKMN 1022

Query: 178  KRPKNIKLEWWKSFVRKRLSKEFQAISMKFKKMRAKQNLPHTCSRKGYARLEAEMKEDSS 357
             RP NI    W+ FV+ + S  F+ +S K+K+ R  Q +PHT SRKG  RL  +MK +S 
Sbjct: 1023 LRPMNISPIEWRKFVKIKTSAAFKVVSDKYKERRRNQ-IPHTTSRKGMVRLAEDMKLESG 1081

Query: 358  NPSSVSR 378
            +PS V+R
Sbjct: 1082 DPSEVTR 1088


>ref|XP_004134263.1| PREDICTED: uncharacterized protein LOC101217008 [Cucumis sativus]
          Length = 1163

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 50/127 (39%), Positives = 73/127 (57%), Gaps = 1/127 (0%)
 Frame = +1

Query: 1   KKVSNETKDSLWTVTKQKFVVPESARHITMRELGYLWRSSKSRFSRIIASCANEEERMEK 180
           +K+S  +K+ LWT                  ++G LWR+ KSR    I S +  EE ++ 
Sbjct: 504 RKLSTTSKEILWTSI----------------QMGRLWRAGKSRIVSQIQSTSTNEELVKM 547

Query: 181 RPKNIK-LEWWKSFVRKRLSKEFQAISMKFKKMRAKQNLPHTCSRKGYARLEAEMKEDSS 357
           +P N++ +  W  FV+++ S  F+A S KFK M+ K  LPHTCSRKGYARL  EM++   
Sbjct: 548 KPSNVQSMHDWMDFVKEKKSATFKAKSEKFKSMK-KMQLPHTCSRKGYARLAEEMRKSCL 606

Query: 358 NPSSVSR 378
           + SSV+R
Sbjct: 607 DSSSVTR 613



 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 46/128 (35%), Positives = 72/128 (56%), Gaps = 2/128 (1%)
 Frame = +1

Query: 1   KKVSNETKDSLWTVTKQKFVVPES-ARHITMRELGYLWRSSKSRFSRIIASCANEEERME 177
           +K+S  +K+ LWT  + ++ V E   R    +++G LWR+ KSR    I S +  EE ++
Sbjct: 195 RKLSTRSKEILWTSIQFRYNVKEDWQRKCIFQKMGRLWRAEKSRILSQIQSTSTSEELVK 254

Query: 178 KRPKNIK-LEWWKSFVRKRLSKEFQAISMKFKKMRAKQNLPHTCSRKGYARLEAEMKEDS 354
            +P NI+ +  W  FV+++ S  F+A S KFK M+  Q LP T  RK Y RL  EM   +
Sbjct: 255 MKPSNIQSVHDWMEFVKEKKSTRFKAKSEKFKSMKEMQ-LPST-RRKSYTRLAEEMAMQN 312

Query: 355 SNPSSVSR 378
               +V++
Sbjct: 313 KLSDNVAK 320



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 35/61 (57%), Positives = 40/61 (65%), Gaps = 2/61 (3%)
 Frame = +1

Query: 202  EWWKSFVRKR--LSKEFQAISMKFKKMRAKQNLPHTCSRKGYARLEAEMKEDSSNPSSVS 375
            +W K   R +  L K  QA S KFK M+ KQ LPHTCSRKGYARL  EMK+   + SSVS
Sbjct: 823  DWRKLSTRSKEVLWKSVQAKSEKFKSMKKKQ-LPHTCSRKGYARLAEEMKKGCPDSSSVS 881

Query: 376  R 378
            R
Sbjct: 882  R 882


>ref|XP_004165999.1| PREDICTED: uncharacterized LOC101217008, partial [Cucumis sativus]
          Length = 308

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 46/116 (39%), Positives = 68/116 (58%), Gaps = 2/116 (1%)
 Frame = +1

Query: 1   KKVSNETKDSLWTVTKQKFVVPES-ARHITMRELGYLWRSSKSRFSRIIASCANEEERME 177
           +K+S  +K+ LWT  + ++ V E   R    +++G LWR+ KSRF   I S +  EE ++
Sbjct: 195 RKLSTRSKEILWTSIQFRYNVKEDWQRKCIFQKMGRLWRAEKSRFLSQIQSTSTNEELVK 254

Query: 178 KRPKNIK-LEWWKSFVRKRLSKEFQAISMKFKKMRAKQNLPHTCSRKGYARLEAEM 342
            +P NI+ +  W  FV+++ S  F+A S KFK M+  Q LP T  RK Y RL  EM
Sbjct: 255 MKPSNIQSVHDWMEFVKEKKSTRFKAKSEKFKSMKEMQ-LPST-RRKSYTRLAEEM 308


>ref|XP_002269174.2| PREDICTED: uncharacterized protein LOC100263584 [Vitis vinifera]
           gi|296081310|emb|CBI17754.3| unnamed protein product
           [Vitis vinifera]
          Length = 367

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 44/132 (33%), Positives = 67/132 (50%), Gaps = 4/132 (3%)
 Frame = +1

Query: 1   KKVSNETKDSLWTVTKQKFVVPESARHITMRELGYLWRSSKSRFSRIIASCANEEERMEK 180
           +KV N  K+ LW+  + KFV+   ++   M  +G  WR+ KS  +R       ++  + K
Sbjct: 72  RKVPNALKEKLWSFLEVKFVIESKSKKKLMGSVGMKWRTFKSYLTRTYIIPFKDQPELLK 131

Query: 181 RPKN----IKLEWWKSFVRKRLSKEFQAISMKFKKMRAKQNLPHTCSRKGYARLEAEMKE 348
            P      I  E W  FV+ RL+++FQ  S    + R+K  L H  SRKGY  L  EMK+
Sbjct: 132 HPPPKYSFIDQEDWDLFVQSRLTEQFQNFSNSQIERRSKHKLVHRLSRKGYVGLADEMKK 191

Query: 349 DSSNPSSVSRAD 384
            + + SS+   D
Sbjct: 192 -NGHISSIEEVD 202


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