BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042907
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pir||S14115 NADH2 dehydrogenase (ubiquinone) (EC 1.6.5.3) chain ...    63   2e-08
gb|AFI44276.1| NADH dehydrogenase subunit 5 (mitochondrion) [Sil...    63   3e-08
ref|YP_004935340.1| NADH dehydrogenase subunit 5 (mitochondrion)...    63   3e-08
ref|YP_004842074.1| NADH dehydrogenase subunit 5 [Beta macrocarp...    63   3e-08
dbj|BAD66755.1| NADH dehydrogenase subunit 5 [Beta vulgaris subs...    63   3e-08

>pir||S14115 NADH2 dehydrogenase (ubiquinone) (EC 1.6.5.3) chain 5, truncated -
           sugar beet mitochondrion
          Length = 591

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 34/62 (54%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
 Frame = +3

Query: 96  PWILSEIFDASCSLIEEGPTLVMFNVLTFNSSLVHLSLFHKW*GGPHCPRFF-YCSILTF 272
           PWI SE+FDAS   + + PT+VM  V+TF SSLVHL         PH PRF  Y SILTF
Sbjct: 95  PWISSEMFDASWGFVFDSPTVVMLIVVTFISSLVHLYSISYMSEDPHSPRFMCYLSILTF 154

Query: 273 FL 278
           F+
Sbjct: 155 FM 156


>gb|AFI44276.1| NADH dehydrogenase subunit 5 (mitochondrion) [Silene vulgaris]
          Length = 670

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 34/62 (54%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
 Frame = +3

Query: 96  PWILSEIFDASCSLIEEGPTLVMFNVLTFNSSLVHLSLFHKW*GGPHCPRFF-YCSILTF 272
           PWI SE+FDAS   + + PT+VM  V+TF SSLVHL         PH PRF  Y SILTF
Sbjct: 63  PWISSEMFDASWGFLFDSPTVVMLIVVTFISSLVHLYSISYMSEDPHSPRFMCYLSILTF 122

Query: 273 FL 278
           F+
Sbjct: 123 FM 124


>ref|YP_004935340.1| NADH dehydrogenase subunit 5 (mitochondrion) [Silene vulgaris]
           gi|344228013|gb|AEM46198.1| NADH dehydrogenase subunit 5
           (mitochondrion) [Silene vulgaris]
           gi|385198411|gb|AFI44301.1| NADH dehydrogenase subunit 5
           (mitochondrion) [Silene vulgaris]
           gi|385198444|gb|AFI44330.1| NADH dehydrogenase subunit 5
           (mitochondrion) [Silene vulgaris]
          Length = 670

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 34/62 (54%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
 Frame = +3

Query: 96  PWILSEIFDASCSLIEEGPTLVMFNVLTFNSSLVHLSLFHKW*GGPHCPRFF-YCSILTF 272
           PWI SE+FDAS   + + PT+VM  V+TF SSLVHL         PH PRF  Y SILTF
Sbjct: 63  PWISSEMFDASWGFLFDSPTVVMLIVVTFISSLVHLYSISYMSEDPHSPRFMCYLSILTF 122

Query: 273 FL 278
           F+
Sbjct: 123 FM 124


>ref|YP_004842074.1| NADH dehydrogenase subunit 5 [Beta macrocarpa]
           gi|345500037|emb|CBX24853.3| NADH dehydrogenase subunit
           5 [Beta macrocarpa]
          Length = 668

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 34/62 (54%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
 Frame = +3

Query: 96  PWILSEIFDASCSLIEEGPTLVMFNVLTFNSSLVHLSLFHKW*GGPHCPRFF-YCSILTF 272
           PWI SE+FDAS   + + PT+VM  V+TF SSLVHL         PH PRF  Y SILTF
Sbjct: 63  PWISSEMFDASWGFLFDSPTVVMLIVVTFISSLVHLYSISYMSEDPHSPRFMCYLSILTF 122

Query: 273 FL 278
           F+
Sbjct: 123 FM 124


>dbj|BAD66755.1| NADH dehydrogenase subunit 5 [Beta vulgaris subsp. vulgaris]
           gi|54606780|dbj|BAD66803.1| NADH dehydrogenase subunit 5
           [Beta vulgaris subsp. vulgaris]
          Length = 670

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 34/62 (54%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
 Frame = +3

Query: 96  PWILSEIFDASCSLIEEGPTLVMFNVLTFNSSLVHLSLFHKW*GGPHCPRFF-YCSILTF 272
           PWI SE+FDAS   + + PT+VM  V+TF SSLVHL         PH PRF  Y SILTF
Sbjct: 63  PWISSEMFDASWGFLFDSPTVVMLIVVTFISSLVHLYSISYMSEDPHSPRFMCYLSILTF 122

Query: 273 FL 278
           F+
Sbjct: 123 FM 124